RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	IMA1	P53051	589 aa		11.78	□□□□□ -0.52
CUE1	YMR264W	AIM14	P53109	570 aa		11.78	□□□□□ -0.52
CUE1	YMR264W	YPL014W	Q02606	381 aa		11.78	□□□□□ -0.52
CUE1	YMR264W	PIR1	Q03178	341 aa		11.78	□□□□□ -0.52
CUE1	YMR264W	HEL2	Q05580	639 aa	Known RBP	11.78	□□□□□ -0.52
CUE1	YMR264W	YPR114W	Q06107	315 aa		11.78	□□□□□ -0.52
CUE1	YMR264W	RIF2	Q06208	395 aa		11.78	□□□□□ -0.52
CUE1	YMR264W	YDL121C	Q07541	149 aa		11.78	□□□□□ -0.52
CUE1	YMR264W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	11.78	□□□□□ -0.52	not detected
CUE1	YMR264W	UPC2	Q12151	913 aa		11.78	□□□□□ -0.52
CUE1	YMR264W	AHA1	Q12449	350 aa	Known RBP	11.78	□□□□□ -0.52
CUE1	YMR264W	ARF2	P19146	181 aa	Known RBP	11.77	□□□□□ -0.53
CUE1	YMR264W	PEX34	P25584	144 aa		11.77	□□□□□ -0.53
CUE1	YMR264W	URK1	P27515	501 aa		11.77	□□□□□ -0.53
CUE1	YMR264W	EXO1	P39875	702 aa		11.77	□□□□□ -0.53
CUE1	YMR264W	SEC26	P41810	973 aa	Known RBP	11.77	□□□□□ -0.53
CUE1	YMR264W	SEC27	P41811	889 aa	Known RBP	11.77	□□□□□ -0.53
CUE1	YMR264W	SPC2	Q04969	178 aa		11.77	□□□□□ -0.53
CUE1	YMR264W	SGT1	Q08446	395 aa		11.77	□□□□□ -0.53
CUE1	YMR264W	NSL1	Q12143	216 aa		11.77	□□□□□ -0.53
CUE1	YMR264W	NHA1	Q99271	985 aa		11.77	□□□□□ -0.53
CUE1	YMR264W	COS2	P0CX12	379 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	COS3	P0CX13	379 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	IDI1	P15496	288 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	PMA2	P19657	947 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	PHO87	P25360	923 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	CSM1	P25651	190 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	MRPL9	P31334	269 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	DPH5	P32469	300 aa	Predicted RBP	11.76	□□□□□ -0.53
CUE1	YMR264W	PHO11	P35842	467 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	YKR078W	P36158	585 aa	Known RBP	11.76	□□□□□ -0.53
CUE1	YMR264W	PHO12	P38693	467 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	GVP36	P40531	326 aa	Known RBP	11.76	□□□□□ -0.53
CUE1	YMR264W	IME4	P41833	600 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	COS4	P43542	379 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	YGR053C	P53234	283 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	VAM6	Q07468	1049 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	YLR049C	Q12110	428 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	SAS5	Q99314	248 aa		11.76	□□□□□ -0.53
CUE1	YMR264W	MNE1	P24720	663 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	ATP7	P30902	174 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	CSE1	P33307	960 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	PDX3	P38075	228 aa	Known RBP	11.75	□□□□□ -0.53
CUE1	YMR264W	GIP1	P38229	639 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	YHR045W	P38775	560 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	DHH1	P39517	506 aa	Known RBP	11.75	□□□□□ -0.53
CUE1	YMR264W	ARB1	P40024	610 aa	Known RBP	11.75	□□□□□ -0.53
CUE1	YMR264W	RPL34B	P40525	121 aa	Known RBP	11.75	□□□□□ -0.53
CUE1	YMR264W	NOP9	P47077	666 aa	Known RBP	11.75	□□□□□ -0.53
CUE1	YMR264W	SEG1	Q04279	960 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	GGA1	Q06336	557 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	HUA2	Q12134	243 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	TAF3	Q12297	353 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	FRT1	Q99332	602 aa		11.75	□□□□□ -0.53
CUE1	YMR264W	ATP6	P00854	259 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	TPK2	P06245	380 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	CCA1	P21269	546 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	SFP1	P32432	683 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	LIP5	P32875	414 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	MET18	P40469	1032 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	FKH2	P41813	862 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	AIM23	P47015	356 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	GET1	P53192	235 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	SHY1	P53266	389 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	ORC3	P54790	616 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	HSP31	Q04432	237 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	GPB1	Q08886	897 aa		11.74	□□□□□ -0.53
CUE1	YMR264W	LEU1	P07264	779 aa	Known RBP	11.73	□□□□□ -0.53
CUE1	YMR264W	TUB1	P09733	447 aa	Known RBP	11.73	□□□□□ -0.53
CUE1	YMR264W	GUK1	P15454	187 aa	Known RBP	11.73	□□□□□ -0.53
CUE1	YMR264W	URA4	P20051	364 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	PHO91	P27514	894 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	TYE7	P33122	291 aa	Predicted RBP	11.73	□□□□□ -0.53
CUE1	YMR264W	SAF1	P38352	637 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	PPX1	P38698	397 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	11.73	□□□□□ -0.53	not detected
CUE1	YMR264W	ARI1	P53111	347 aa	Known RBP	11.73	□□□□□ -0.53
CUE1	YMR264W	SPC105	P53148	917 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	VAC7	P53950	1165 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	PRP38	Q00723	242 aa	Predicted RBP	11.73	□□□□□ -0.53
CUE1	YMR264W	NSE5	Q03718	556 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	VTA1	Q06263	330 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	YLR413W	Q06689	675 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	IRC10	Q08118	586 aa		11.73	□□□□□ -0.53
CUE1	YMR264W	THI80	P35202	319 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	LRG1	P35688	1017 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	BEM4	P39011	633 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	HEM14	P40012	539 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	REF2	P42073	533 aa	Predicted RBP	11.72	□□□□□ -0.53
CUE1	YMR264W	MPS3	P47069	682 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	YJR124C	P47159	448 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	YNL018C	P53976	612 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	PEX13	P80667	386 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	NAN1	Q02931	896 aa	Known RBP	11.72	□□□□□ -0.53
CUE1	YMR264W	TRM12	Q04235	462 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	SSL1	Q04673	461 aa	Predicted RBP	11.72	□□□□□ -0.53
CUE1	YMR264W	UAF30	Q08747	228 aa		11.72	□□□□□ -0.53
CUE1	YMR264W	SLF1	Q12034	447 aa	Known RBP	11.72	□□□□□ -0.53
CUE1	YMR264W	MRPS28	P21771	286 aa		11.71	□□□□□ -0.53
CUE1	YMR264W	YCK2	P23292	546 aa	Known RBP	11.71	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms