RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C ARA2Q04212 335 aa5.5□□□□□ -1.53
VBA1YMR088C GTO3Q04806 366 aa5.5□□□□□ -1.53
VBA1YMR088C GTB1Q04924 702 aa5.5□□□□□ -1.53
VBA1YMR088C OPT2Q06593 877 aa5.5□□□□□ -1.53
VBA1YMR088C WHI4Q07655 649 aaKnown RBP5.5□□□□□ -1.53
VBA1YMR088C DIA2Q08496 732 aaPredicted RBP5.5□□□□□ -1.53
VBA1YMR088C PHO4P07270 312 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C SSA3P09435 649 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C RNR2P09938 399 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C PCK1P10963 549 aa5.49□□□□□ -1.53
VBA1YMR088C FBA1P14540 359 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C BAS1P22035 811 aa5.49□□□□□ -1.53
VBA1YMR088C SAN1P22470 610 aa5.49□□□□□ -1.53
VBA1YMR088C SUI1P32911 108 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C NIC96P34077 839 aa5.49□□□□□ -1.53
VBA1YMR088C ECM31P38122 312 aa5.49□□□□□ -1.53
VBA1YMR088C MAL33P38157 468 aa5.49□□□□□ -1.53
VBA1YMR088C HEK2P38199 381 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
VBA1YMR088C PEX28P38848 579 aa5.49□□□□□ -1.53
VBA1YMR088C FIR1P40020 876 aa5.49□□□□□ -1.53
VBA1YMR088C RGI2P40188 164 aa5.49□□□□□ -1.53
VBA1YMR088C NTA1P40354 457 aa5.49□□□□□ -1.53
VBA1YMR088C FYV10P40492 516 aa5.49□□□□□ -1.53
VBA1YMR088C IMA5P40884 581 aa5.49□□□□□ -1.53
VBA1YMR088C TRS85P46944 698 aa5.49□□□□□ -1.53
VBA1YMR088C PSP2P50109 593 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C PSP1P50896 841 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C PCL10P53124 433 aa5.49□□□□□ -1.53
VBA1YMR088C TWF1P53250 332 aa5.49□□□□□ -1.53
VBA1YMR088C YAP1802P53309 568 aa5.49□□□□□ -1.53
VBA1YMR088C RRN9P53437 365 aa5.49□□□□□ -1.53
VBA1YMR088C NGL3Q03210 505 aa5.49□□□□□ -1.53
VBA1YMR088C CSI1Q04368 295 aa5.49□□□□□ -1.53
VBA1YMR088C YLR346CQ06139 101 aa5.49□□□□□ -1.53
VBA1YMR088C VTA1Q06263 330 aa5.49□□□□□ -1.53
VBA1YMR088C LUC7Q07508 261 aaPredicted RBP5.49□□□□□ -1.53
VBA1YMR088C SDO1Q07953 250 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C NBA1Q08229 501 aaKnown RBP5.49□□□□□ -1.53
VBA1YMR088C SRO7Q12038 1033 aa5.49□□□□□ -1.53
VBA1YMR088C CAT8P39113 1433 aa5.48□□□□□ -1.53
VBA1YMR088C VPS15P22219 1454 aa5.48□□□□□ -1.53
VBA1YMR088C HXK2P04807 486 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C RPP2AP05319 106 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C RPL6BP05739 176 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C GPA1P08539 472 aa5.48□□□□□ -1.53
VBA1YMR088C CDC23P16522 626 aa5.48□□□□□ -1.53
VBA1YMR088C AMD2P22580 549 aa5.48□□□□□ -1.53
VBA1YMR088C RNA15P25299 296 aaPredicted RBP5.48□□□□□ -1.53
VBA1YMR088C GEX1P25596 615 aa5.48□□□□□ -1.53
VBA1YMR088C SFP1P32432 683 aa5.48□□□□□ -1.53
VBA1YMR088C GCD7P32502 381 aaPredicted RBP5.48□□□□□ -1.53
VBA1YMR088C SIF2P38262 535 aa5.48□□□□□ -1.53
VBA1YMR088C MRX1P40050 688 aa5.48□□□□□ -1.53
VBA1YMR088C RTR1P40084 226 aaPredicted RBP5.48□□□□□ -1.53
VBA1YMR088C LSM5P40089 93 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C SIP5P40210 489 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C VHR1P40522 640 aa5.48□□□□□ -1.53
VBA1YMR088C VMA13P41807 478 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C IDS2P46958 469 aa5.48□□□□□ -1.53
VBA1YMR088C RFX1P48743 811 aa5.48□□□□□ -1.53
VBA1YMR088C YGR250CP53316 781 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C COS6P53344 381 aa5.48□□□□□ -1.53
VBA1YMR088C YNL181WP53878 407 aa5.48□□□□□ -1.53
VBA1YMR088C EOS1P53938 366 aa5.48□□□□□ -1.53
VBA1YMR088C IMP4P53941 290 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C ALO1P54783 526 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C RMT2Q03305 412 aa5.48□□□□□ -1.53
VBA1YMR088C UGO1Q03327 502 aa5.48□□□□□ -1.53
VBA1YMR088C ARX1Q03862 593 aaKnown RBP5.48□□□□□ -1.53
VBA1YMR088C FMP42Q04991 504 aa5.48□□□□□ -1.53
VBA1YMR088C YLR173WQ06247 608 aa5.48□□□□□ -1.53
VBA1YMR088C YLR177WQ06251 628 aa5.48□□□□□ -1.53
VBA1YMR088C NSE1Q07913 336 aa5.48□□□□□ -1.53
VBA1YMR088C REX4Q08237 289 aa5.48□□□□□ -1.53
VBA1YMR088C GUP2Q08929 609 aa5.48□□□□□ -1.53
VBA1YMR088C VAM3Q12241 283 aa5.48□□□□□ -1.53
VBA1YMR088C FYV7Q12247 151 aa5.48□□□□□ -1.53
VBA1YMR088C DCN1Q12395 269 aa5.48□□□□□ -1.53
VBA1YMR088C SSM4P40318 1319 aa5.48□□□□□ -1.53
VBA1YMR088C BNR1P40450 1375 aa5.48□□□□□ -1.53
VBA1YMR088C SAM1P10659 382 aaKnown RBP5.47□□□□□ -1.53
VBA1YMR088C RPL4AP10664 362 aaKnown RBP5.47□□□□□ -1.53
VBA1YMR088C PDC5P16467 563 aaKnown RBP5.47□□□□□ -1.53
VBA1YMR088C ATP12P22135 325 aa5.47□□□□□ -1.53
VBA1YMR088C NPR1P22211 790 aa5.47□□□□□ -1.53
VBA1YMR088C RRP7P25368 297 aaPredicted RBP5.47□□□□□ -1.53
VBA1YMR088C ATP11P32453 318 aa5.47□□□□□ -1.53
VBA1YMR088C GSH1P32477 678 aa5.47□□□□□ -1.53
VBA1YMR088C NAB2P32505 525 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
VBA1YMR088C TCA17P32613 152 aa5.47□□□□□ -1.53
VBA1YMR088C MTH1P35198 433 aa5.47□□□□□ -1.53
VBA1YMR088C YHL041WP38730 149 aa5.47□□□□□ -1.53
VBA1YMR088C QNS1P38795 714 aaKnown RBP5.47□□□□□ -1.53
VBA1YMR088C REV7P38927 245 aa5.47□□□□□ -1.53
VBA1YMR088C OAF1P39720 1047 aaPredicted RBP5.47□□□□□ -1.53
VBA1YMR088C AST2P39945 430 aaKnown RBP5.47□□□□□ -1.53
VBA1YMR088C YER010CP40011 234 aa5.47□□□□□ -1.53
VBA1YMR088C RRT14P40470 206 aa5.47□□□□□ -1.53
VBA1YMR088C SER33P40510 469 aa5.47□□□□□ -1.53
VBA1YMR088C FET4P40988 552 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms