RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W KAP95Q06142 861 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W MMR1Q06324 491 aa3.66□□□□□ -1.82
LCB5YLR260W TY1A-NL1Q12391 440 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W FRS2P15625 503 aaKnown RBP3.65□□□□□ -1.83
LCB5YLR260W ACO1P19414 778 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
LCB5YLR260W RRP43P25359 394 aaPredicted RBP3.65□□□□□ -1.83
LCB5YLR260W OCA4P25366 362 aa3.65□□□□□ -1.83
LCB5YLR260W MSP1P28737 362 aa3.65□□□□□ -1.83
LCB5YLR260W DPH5P32469 300 aaPredicted RBP3.65□□□□□ -1.83
LCB5YLR260W KRE6P32486 720 aa3.65□□□□□ -1.83
LCB5YLR260W PRX1P34227 261 aaKnown RBP3.65□□□□□ -1.83
LCB5YLR260W HEL1P36113 551 aa3.65□□□□□ -1.83
LCB5YLR260W YKR051WP36142 418 aa3.65□□□□□ -1.83
LCB5YLR260W DAD2P36162 133 aa3.65□□□□□ -1.83
LCB5YLR260W VID24P38263 362 aa3.65□□□□□ -1.83
LCB5YLR260W YJL070CP40361 888 aa3.65□□□□□ -1.83
LCB5YLR260W YIR016WP40572 265 aa3.65□□□□□ -1.83
LCB5YLR260W NGL3Q03210 505 aa3.65□□□□□ -1.83
LCB5YLR260W TDA6Q06466 467 aa3.65□□□□□ -1.83
LCB5YLR260W FMP45Q07651 309 aa3.65□□□□□ -1.83
LCB5YLR260W THI72Q08579 599 aa3.65□□□□□ -1.83
LCB5YLR260W ALG6Q12001 544 aaKnown RBP3.65□□□□□ -1.83
LCB5YLR260W RTK1Q12100 620 aaPredicted RBP3.65□□□□□ -1.83
LCB5YLR260W CHS5Q12114 671 aaKnown RBP3.65□□□□□ -1.83
LCB5YLR260W SEC39Q12745 709 aa3.65□□□□□ -1.83
LCB5YLR260W ADF1Q2V2Q1 113 aa3.65□□□□□ -1.83
LCB5YLR260W YBR126W-AQ8TGU7 68 aa3.65□□□□□ -1.83
LCB5YLR260W TOR1P35169 2470 aa3.65□□□□□ -1.83
LCB5YLR260W RPL11AP0C0W9 174 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W YML002WP0CF17 737 aa3.64□□□□□ -1.83
LCB5YLR260W STE12P13574 688 aa3.64□□□□□ -1.83
LCB5YLR260W PEX1P24004 1043 aa3.64□□□□□ -1.83
LCB5YLR260W PHO84P25297 587 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W PHO91P27514 894 aa3.64□□□□□ -1.83
LCB5YLR260W URA7P28274 579 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W RPC82P32349 654 aa3.64□□□□□ -1.83
LCB5YLR260W EFB1P32471 206 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W COT1P32798 439 aa3.64□□□□□ -1.83
LCB5YLR260W SRO77P38163 1010 aa3.64□□□□□ -1.83
LCB5YLR260W APN2P38207 520 aa3.64□□□□□ -1.83
LCB5YLR260W YER186CP40101 306 aa3.64□□□□□ -1.83
LCB5YLR260W MAF1P41910 395 aa3.64□□□□□ -1.83
LCB5YLR260W ORC5P50874 479 aa3.64□□□□□ -1.83
LCB5YLR260W YNL134CP53912 376 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W RKM2Q03942 479 aa3.64□□□□□ -1.83
LCB5YLR260W ADE13Q05911 482 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W SGO1Q08490 590 aa3.64□□□□□ -1.83
LCB5YLR260W RPN5Q12250 445 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W HER1Q12276 1246 aa3.64□□□□□ -1.83
LCB5YLR260W APC2Q12440 853 aa3.64□□□□□ -1.83
LCB5YLR260W AVL9Q12500 764 aa3.64□□□□□ -1.83
LCB5YLR260W RPL11BQ3E757 174 aaPredicted RBP3.64□□□□□ -1.83
LCB5YLR260W NBL1Q3E7Y6 73 aa3.64□□□□□ -1.83
LCB5YLR260W ISN1Q99312 450 aa3.64□□□□□ -1.83
LCB5YLR260W ADE3P07245 946 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W CKA2P19454 339 aa3.64□□□□□ -1.83
LCB5YLR260W SIR1P21691 654 aa3.64□□□□□ -1.83
LCB5YLR260W YCK1P23291 538 aa3.64□□□□□ -1.83
LCB5YLR260W SPS22P25380 463 aa3.64□□□□□ -1.83
LCB5YLR260W RSA4P25382 515 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W YCL002CP25565 263 aa3.64□□□□□ -1.83
LCB5YLR260W CAP1P28495 268 aaKnown RBP3.64□□□□□ -1.83
LCB5YLR260W ACP1P32463 125 aa3.64□□□□□ -1.83
LCB5YLR260W YSC83P32792 385 aa3.64□□□□□ -1.83
LCB5YLR260W MRPL36P36531 177 aa3.64□□□□□ -1.83
LCB5YLR260W PPS1P38148 807 aa3.64□□□□□ -1.83
LCB5YLR260W MCX1P38323 520 aaPredicted RBP3.64□□□□□ -1.83
LCB5YLR260W SMF1P38925 575 aa3.64□□□□□ -1.83
LCB5YLR260W YDR089WP38966 869 aa3.64□□□□□ -1.83
LCB5YLR260W YEL057CP39983 233 aa3.64□□□□□ -1.83
LCB5YLR260W INA22P40576 216 aa3.64□□□□□ -1.83
LCB5YLR260W STB4P50104 949 aa3.64□□□□□ -1.83
LCB5YLR260W BUD9P53226 547 aa3.64□□□□□ -1.83
LCB5YLR260W GIM3P53900 129 aa3.64□□□□□ -1.83
LCB5YLR260W LUC7Q07508 261 aaPredicted RBP3.64□□□□□ -1.83
LCB5YLR260W YOR223WQ12015 292 aa3.64□□□□□ -1.83
LCB5YLR260W NMD4Q12129 218 aa3.64□□□□□ -1.83
LCB5YLR260W Q0142Q9ZZW4 58 aa3.64□□□□□ -1.83
LCB5YLR260W HIS4P00815 799 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W GAL7P08431 366 aa3.63□□□□□ -1.83
LCB5YLR260W CDC24P11433 854 aaPredicted RBP3.63□□□□□ -1.83
LCB5YLR260W CBS1P14066 229 aa3.63□□□□□ -1.83
LCB5YLR260W PWP1P21304 576 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W CLB3P24870 427 aa3.63□□□□□ -1.83
LCB5YLR260W YJU2P28320 278 aaPredicted RBP3.63□□□□□ -1.83
LCB5YLR260W HMX1P32339 317 aa3.63□□□□□ -1.83
LCB5YLR260W ASF2P32448 525 aaPredicted RBP3.63□□□□□ -1.83
LCB5YLR260W DOA4P32571 926 aa3.63□□□□□ -1.83
LCB5YLR260W BUD2P33314 1104 aa3.63□□□□□ -1.83
LCB5YLR260W KDX1P36005 433 aa3.63□□□□□ -1.83
LCB5YLR260W YKL151CP36059 337 aa3.63□□□□□ -1.83
LCB5YLR260W MRX3P38172 270 aa3.63□□□□□ -1.83
LCB5YLR260W COS111P38308 924 aa3.63□□□□□ -1.83
LCB5YLR260W YMR124WP39523 943 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W RLP7P40693 322 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W MAD2P40958 196 aa3.63□□□□□ -1.83
LCB5YLR260W ARC1P46672 376 aaKnown RBP3.63□□□□□ -1.83
LCB5YLR260W YGR045CP53229 120 aa3.63□□□□□ -1.83
LCB5YLR260W NCE103P53615 221 aa3.63□□□□□ -1.83
LCB5YLR260W PDR16P53860 351 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms