RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C NUM1Q00402 2748 aa5.44□□□□□ -1.54
VPS1YKR001C HAP4P14064 554 aa5.44□□□□□ -1.54
VPS1YKR001C DAL7P21826 554 aa5.44□□□□□ -1.54
VPS1YKR001C IMG2P25642 146 aaPredicted RBP5.44□□□□□ -1.54
VPS1YKR001C DBF4P32325 704 aa5.44□□□□□ -1.54
VPS1YKR001C HMT1P38074 348 aa5.44□□□□□ -1.54
VPS1YKR001C SUL1P38359 859 aa5.44□□□□□ -1.54
VPS1YKR001C CCT6P39079 546 aa5.44□□□□□ -1.54
VPS1YKR001C SIP5P40210 489 aaKnown RBP5.44□□□□□ -1.54
VPS1YKR001C CIR1P42940 261 aa5.44□□□□□ -1.54
VPS1YKR001C YJL045WP47052 634 aa5.44□□□□□ -1.54
VPS1YKR001C YJR141WP47172 347 aaPredicted RBP5.44□□□□□ -1.54
VPS1YKR001C YGR237CP50089 785 aa5.44□□□□□ -1.54
VPS1YKR001C SEH1P53011 349 aaKnown RBP5.44□□□□□ -1.54
VPS1YKR001C ATF2P53296 535 aa5.44□□□□□ -1.54
VPS1YKR001C PGA2P53903 129 aa5.44□□□□□ -1.54
VPS1YKR001C VPS38Q05919 439 aa5.44□□□□□ -1.54
VPS1YKR001C TFC6Q06339 672 aa5.44□□□□□ -1.54
VPS1YKR001C YPR084WQ06821 456 aa5.44□□□□□ -1.54
VPS1YKR001C YPR091CQ06833 770 aa5.44□□□□□ -1.54
VPS1YKR001C TAF10Q12030 206 aa5.44□□□□□ -1.54
VPS1YKR001C FRE6Q12473 712 aa5.44□□□□□ -1.54
VPS1YKR001C CYT1P07143 309 aa5.44□□□□□ -1.54
VPS1YKR001C YGL041W-AP0C5N3 154 aa5.44□□□□□ -1.54
VPS1YKR001C APA2P22108 325 aa5.44□□□□□ -1.54
VPS1YKR001C COQ8P27697 501 aa5.44□□□□□ -1.54
VPS1YKR001C FUN26P31381 517 aa5.44□□□□□ -1.54
VPS1YKR001C CYM1P32898 989 aa5.44□□□□□ -1.54
VPS1YKR001C RFT1P38206 574 aaPredicted RBP5.44□□□□□ -1.54
VPS1YKR001C GIP4P39732 760 aa5.44□□□□□ -1.54
VPS1YKR001C TDA10P42938 290 aa5.44□□□□□ -1.54
VPS1YKR001C SAD1P43589 448 aa5.44□□□□□ -1.54
VPS1YKR001C RSM26P47141 266 aa5.44□□□□□ -1.54
VPS1YKR001C NAS6P50086 228 aa5.44□□□□□ -1.54
VPS1YKR001C MND1P53102 219 aa5.44□□□□□ -1.54
VPS1YKR001C TWF1P53250 332 aa5.44□□□□□ -1.54
VPS1YKR001C YGR250CP53316 781 aaKnown RBP5.44□□□□□ -1.54
VPS1YKR001C ZRG17P53735 605 aa5.44□□□□□ -1.54
VPS1YKR001C MRPL19P53875 158 aa5.44□□□□□ -1.54
VPS1YKR001C NGL3Q03210 505 aa5.44□□□□□ -1.54
VPS1YKR001C RSN1Q03516 953 aa5.44□□□□□ -1.54
VPS1YKR001C DFG5Q05031 458 aa5.44□□□□□ -1.54
VPS1YKR001C MHR1Q06630 226 aa5.44□□□□□ -1.54
VPS1YKR001C HFI1Q12060 488 aa5.44□□□□□ -1.54
VPS1YKR001C OCA6Q12454 224 aa5.44□□□□□ -1.54
VPS1YKR001C PAR32Q12515 295 aaKnown RBP5.44□□□□□ -1.54
VPS1YKR001C RRP12Q12754 1228 aaKnown RBP5.44□□□□□ -1.54
VPS1YKR001C YMR085WP0CF18 432 aa5.43□□□□□ -1.54
VPS1YKR001C NSP1P14907 823 aaKnown RBP5.43□□□□□ -1.54
VPS1YKR001C PDX1P16451 410 aa5.43□□□□□ -1.54
VPS1YKR001C PRP4P20053 465 aaKnown RBP5.43□□□□□ -1.54
VPS1YKR001C SAN1P22470 610 aa5.43□□□□□ -1.54
VPS1YKR001C CNA1P23287 553 aa5.43□□□□□ -1.54
VPS1YKR001C YKR015CP36111 568 aa5.43□□□□□ -1.54
VPS1YKR001C GLG1P36143 616 aa5.43□□□□□ -1.54
VPS1YKR001C PTC4P38089 393 aa5.43□□□□□ -1.54
VPS1YKR001C YBL036CP38197 257 aa5.43□□□□□ -1.54
VPS1YKR001C SPP381P38282 291 aaPredicted RBP5.43□□□□□ -1.54
VPS1YKR001C NEM1P38757 446 aa5.43□□□□□ -1.54
VPS1YKR001C AIM2P39721 246 aa5.43□□□□□ -1.54
VPS1YKR001C GID8P40208 455 aa5.43□□□□□ -1.54
VPS1YKR001C ALG8P40351 577 aa5.43□□□□□ -1.54
VPS1YKR001C CCT5P40413 562 aaKnown RBP5.43□□□□□ -1.54
VPS1YKR001C FYV10P40492 516 aa5.43□□□□□ -1.54
VPS1YKR001C YFL052WP43551 465 aa5.43□□□□□ -1.54
VPS1YKR001C GLG2P47011 380 aa5.43□□□□□ -1.54
VPS1YKR001C MPS3P47069 682 aa5.43□□□□□ -1.54
VPS1YKR001C YAP1802P53309 568 aa5.43□□□□□ -1.54
VPS1YKR001C RAD30Q04049 632 aa5.43□□□□□ -1.54
VPS1YKR001C HBT1Q07653 1046 aaKnown RBP5.43□□□□□ -1.54
VPS1YKR001C YOL019WQ08157 551 aa5.43□□□□□ -1.54
VPS1YKR001C GPN2Q08726 347 aaPredicted RBP5.43□□□□□ -1.54
VPS1YKR001C GCN4P03069 281 aa5.42□□□□□ -1.54
VPS1YKR001C SBP1P10080 294 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C ARG1P22768 420 aa5.42□□□□□ -1.54
VPS1YKR001C CTR86P25355 563 aa5.42□□□□□ -1.54
VPS1YKR001C ERG1P32476 496 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C PET309P32522 965 aaPredicted RBP5.42□□□□□ -1.54
VPS1YKR001C MRT4P33201 236 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C DID4P36108 232 aa5.42□□□□□ -1.54
VPS1YKR001C LAS1P36146 502 aaPredicted RBP5.42□□□□□ -1.54
VPS1YKR001C ECM31P38122 312 aa5.42□□□□□ -1.54
VPS1YKR001C MAL33P38157 468 aa5.42□□□□□ -1.54
VPS1YKR001C YBR238CP38330 731 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C RCK2P38623 610 aa5.42□□□□□ -1.54
VPS1YKR001C YHL017WP38745 532 aa5.42□□□□□ -1.54
VPS1YKR001C MSS4P38994 779 aa5.42□□□□□ -1.54
VPS1YKR001C OAF1P39720 1047 aaPredicted RBP5.42□□□□□ -1.54
VPS1YKR001C DLD3P39976 496 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C SCC4P40090 624 aa5.42□□□□□ -1.54
VPS1YKR001C MMF1P40185 145 aaKnown RBP5.42□□□□□ -1.54
VPS1YKR001C ATM1P40416 690 aa5.42□□□□□ -1.54
VPS1YKR001C CAB2P40506 365 aa5.42□□□□□ -1.54
VPS1YKR001C MSS2P40990 351 aa5.42□□□□□ -1.54
VPS1YKR001C MDJ2P42834 146 aa5.42□□□□□ -1.54
VPS1YKR001C TUB4P53378 473 aa5.42□□□□□ -1.54
VPS1YKR001C VPS9P54787 451 aa5.42□□□□□ -1.54
VPS1YKR001C PET117Q02771 107 aa5.42□□□□□ -1.54
VPS1YKR001C ISU1Q03020 165 aa5.42□□□□□ -1.54
VPS1YKR001C NHX1Q04121 633 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms