RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W AMS1P22855 1083 aa3.34□□□□□ -1.87
SIZ1YDR409W CNA1P23287 553 aa3.34□□□□□ -1.87
SIZ1YDR409W SUR1P33300 382 aa3.34□□□□□ -1.87
SIZ1YDR409W DIA4P38705 446 aaPredicted RBP3.34□□□□□ -1.87
SIZ1YDR409W YHR131CP38835 850 aa3.34□□□□□ -1.87
SIZ1YDR409W CCT6P39079 546 aa3.34□□□□□ -1.87
SIZ1YDR409W CAB2P40506 365 aa3.34□□□□□ -1.87
SIZ1YDR409W MAM33P40513 266 aa3.34□□□□□ -1.87
SIZ1YDR409W AAD14P42884 376 aa3.34□□□□□ -1.87
SIZ1YDR409W YJL107CP42947 387 aa3.34□□□□□ -1.87
SIZ1YDR409W SAD1P43589 448 aa3.34□□□□□ -1.87
SIZ1YDR409W RSM26P47141 266 aa3.34□□□□□ -1.87
SIZ1YDR409W COS5P47187 383 aa3.34□□□□□ -1.87
SIZ1YDR409W LSB1P53281 241 aa3.34□□□□□ -1.87
SIZ1YDR409W DCP2P53550 970 aaKnown RBP3.34□□□□□ -1.87
SIZ1YDR409W SFB2P53953 876 aa3.34□□□□□ -1.87
SIZ1YDR409W GPD1Q00055 391 aaKnown RBP3.34□□□□□ -1.87
SIZ1YDR409W IRC4Q03036 179 aa3.34□□□□□ -1.87
SIZ1YDR409W YDR222WQ04925 415 aa3.34□□□□□ -1.87
SIZ1YDR409W YIG1Q08956 461 aa3.34□□□□□ -1.87
SIZ1YDR409W PDH1Q12428 516 aaKnown RBP3.34□□□□□ -1.87
SIZ1YDR409W ATP2P00830 511 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W MNE1P24720 663 aa3.34□□□□□ -1.88
SIZ1YDR409W KAR4P25583 335 aa3.34□□□□□ -1.88
SIZ1YDR409W DBF4P32325 704 aa3.34□□□□□ -1.88
SIZ1YDR409W CUE2P36075 443 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W CCL1P37366 393 aa3.34□□□□□ -1.88
SIZ1YDR409W DUG2P38149 878 aa3.34□□□□□ -1.88
SIZ1YDR409W ALG3P38179 458 aa3.34□□□□□ -1.88
SIZ1YDR409W POP4P38336 279 aa3.34□□□□□ -1.88
SIZ1YDR409W TRM5P38793 499 aa3.34□□□□□ -1.88
SIZ1YDR409W YER034WP40022 185 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W SEC28P40509 296 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W RLP7P40693 322 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W SMK1P41808 388 aa3.34□□□□□ -1.88
SIZ1YDR409W VNX1P42839 908 aa3.34□□□□□ -1.88
SIZ1YDR409W LOC1P43586 204 aaPredicted RBP3.34□□□□□ -1.88
SIZ1YDR409W YDL183CP48569 320 aa3.34□□□□□ -1.88
SIZ1YDR409W VMA10P48836 114 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W IMD4P50094 524 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W YGL108CP53139 140 aa3.34□□□□□ -1.88
SIZ1YDR409W DUO1P53168 247 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W DSL1P53847 754 aa3.34□□□□□ -1.88
SIZ1YDR409W PEX25Q02969 394 aa3.34□□□□□ -1.88
SIZ1YDR409W YML082WQ04533 649 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W RSF1Q05043 376 aa3.34□□□□□ -1.88
SIZ1YDR409W NGL1Q08213 363 aaKnown RBP3.34□□□□□ -1.88
SIZ1YDR409W TRE1Q08919 783 aa3.34□□□□□ -1.88
SIZ1YDR409W GPM3Q12326 303 aa3.34□□□□□ -1.88
SIZ1YDR409W CMD1P06787 147 aaKnown RBP3.33□□□□□ -1.88
SIZ1YDR409W PHO3P24031 467 aa3.33□□□□□ -1.88
SIZ1YDR409W CLB2P24869 491 aa3.33□□□□□ -1.88
SIZ1YDR409W TIF3P34167 436 aaKnown RBP3.33□□□□□ -1.88
SIZ1YDR409W POL12P38121 705 aaPredicted RBP3.33□□□□□ -1.88
SIZ1YDR409W ETP1P38748 585 aaKnown RBP3.33□□□□□ -1.88
SIZ1YDR409W YTA12P40341 825 aa3.33□□□□□ -1.88
SIZ1YDR409W ULI1P43604 169 aa3.33□□□□□ -1.88
SIZ1YDR409W STB2P46679 850 aa3.33□□□□□ -1.88
SIZ1YDR409W CTR1P49573 406 aa3.33□□□□□ -1.88
SIZ1YDR409W YGR111WP53265 400 aa3.33□□□□□ -1.88
SIZ1YDR409W BIO5P53744 561 aaKnown RBP3.33□□□□□ -1.88
SIZ1YDR409W KTR5P53966 522 aaPredicted RBP3.33□□□□□ -1.88
SIZ1YDR409W NHX1Q04121 633 aa3.33□□□□□ -1.88
SIZ1YDR409W MSC3Q05812 728 aa3.33□□□□□ -1.88
SIZ1YDR409W YDL114WQ07530 308 aa3.33□□□□□ -1.88
SIZ1YDR409W XYL2Q07993 356 aa3.33□□□□□ -1.88
SIZ1YDR409W YLR053CQ12026 108 aa3.33□□□□□ -1.88
SIZ1YDR409W TY3A-GQ12173 290 aa3.33□□□□□ -1.88
SIZ1YDR409W RRD2Q12461 358 aa3.33□□□□□ -1.88
SIZ1YDR409W ENT1Q12518 454 aa3.33□□□□□ -1.88
SIZ1YDR409W TY3A-IQ99219 290 aa3.33□□□□□ -1.88
SIZ1YDR409W RAD10P06838 210 aa3.33□□□□□ -1.88
SIZ1YDR409W PCK1P10963 549 aa3.33□□□□□ -1.88
SIZ1YDR409W RAD14P28519 371 aa3.33□□□□□ -1.88
SIZ1YDR409W DGR2P32330 852 aa3.33□□□□□ -1.88
SIZ1YDR409W TFC1P32367 649 aa3.33□□□□□ -1.88
SIZ1YDR409W MDL2P33311 773 aa3.33□□□□□ -1.88
SIZ1YDR409W RCN1P36054 211 aa3.33□□□□□ -1.88
SIZ1YDR409W SRO77P38163 1010 aa3.33□□□□□ -1.88
SIZ1YDR409W SLM4P38247 162 aa3.33□□□□□ -1.88
SIZ1YDR409W MMS4P38257 691 aa3.33□□□□□ -1.88
SIZ1YDR409W HSL7P38274 827 aa3.33□□□□□ -1.88
SIZ1YDR409W YBP1P38315 674 aa3.33□□□□□ -1.88
SIZ1YDR409W BFR1P38934 470 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SIZ1YDR409W NPT1P39683 429 aaKnown RBP3.33□□□□□ -1.88
SIZ1YDR409W EMP65P40085 556 aa3.33□□□□□ -1.88
SIZ1YDR409W YTA6P40328 754 aa3.33□□□□□ -1.88
SIZ1YDR409W BRE2P43132 505 aa3.33□□□□□ -1.88
SIZ1YDR409W BNA3P47039 444 aaKnown RBP3.33□□□□□ -1.88
SIZ1YDR409W RPT4P53549 437 aaKnown RBP3.33□□□□□ -1.88
SIZ1YDR409W SLT2Q00772 484 aa3.33□□□□□ -1.88
SIZ1YDR409W RPA49Q01080 415 aaPredicted RBP3.33□□□□□ -1.88
SIZ1YDR409W ABZ2Q03266 374 aa3.33□□□□□ -1.88
SIZ1YDR409W RAD30Q04049 632 aa3.33□□□□□ -1.88
SIZ1YDR409W GPI17Q04080 534 aa3.33□□□□□ -1.88
SIZ1YDR409W SMP3Q04174 516 aa3.33□□□□□ -1.88
SIZ1YDR409W AIM33Q04516 312 aa3.33□□□□□ -1.88
SIZ1YDR409W ECM18Q04623 453 aa3.33□□□□□ -1.88
SIZ1YDR409W YMR074CQ04773 145 aa3.33□□□□□ -1.88
SIZ1YDR409W COQ9Q05779 260 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms