RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C KIN82P25341 720 aa3.48□□□□□ -1.85
CDC40YDR364C BMH1P29311 267 aaKnown RBP3.48□□□□□ -1.85
CDC40YDR364C PRE4P30657 266 aa3.48□□□□□ -1.85
CDC40YDR364C MUM2P38236 366 aa3.48□□□□□ -1.85
CDC40YDR364C PHO88P38264 188 aaPredicted RBP3.48□□□□□ -1.85
CDC40YDR364C STB5P38699 743 aa3.48□□□□□ -1.85
CDC40YDR364C YHR112CP38716 378 aa3.48□□□□□ -1.85
CDC40YDR364C NDT80P38830 627 aa3.48□□□□□ -1.85
CDC40YDR364C GID8P40208 455 aa3.48□□□□□ -1.85
CDC40YDR364C XBP1P40489 647 aa3.48□□□□□ -1.85
CDC40YDR364C IST3P40565 148 aaPredicted RBP3.48□□□□□ -1.85
CDC40YDR364C BIT61P47041 543 aa3.48□□□□□ -1.85
CDC40YDR364C ZAP1P47043 880 aa3.48□□□□□ -1.85
CDC40YDR364C ASE1P50275 885 aa3.48□□□□□ -1.85
CDC40YDR364C IMA1P53051 589 aa3.48□□□□□ -1.85
CDC40YDR364C DUO1P53168 247 aaKnown RBP3.48□□□□□ -1.85
CDC40YDR364C SOL4P53315 255 aa3.48□□□□□ -1.85
CDC40YDR364C RET3P53600 189 aa3.48□□□□□ -1.85
CDC40YDR364C ARE2P53629 642 aaKnown RBP3.48□□□□□ -1.85
CDC40YDR364C YNR061CP53747 219 aa3.48□□□□□ -1.85
CDC40YDR364C YML037CQ03703 340 aa3.48□□□□□ -1.85
CDC40YDR364C AIM33Q04516 312 aa3.48□□□□□ -1.85
CDC40YDR364C MCM21Q06675 368 aa3.48□□□□□ -1.85
CDC40YDR364C DIA2Q08496 732 aaPredicted RBP3.48□□□□□ -1.85
CDC40YDR364C ICL2Q12031 575 aa3.48□□□□□ -1.85
CDC40YDR364C AIM41Q12032 185 aa3.48□□□□□ -1.85
CDC40YDR364C YBR126W-AQ8TGU7 68 aa3.48□□□□□ -1.85
CDC40YDR364C ARG3P05150 338 aa3.47□□□□□ -1.85
CDC40YDR364C ERG11P10614 530 aa3.47□□□□□ -1.85
CDC40YDR364C CDC24P11433 854 aaPredicted RBP3.47□□□□□ -1.85
CDC40YDR364C RPC53P25441 422 aa3.47□□□□□ -1.85
CDC40YDR364C GSY2P27472 705 aa3.47□□□□□ -1.85
CDC40YDR364C MTC7P32633 139 aa3.47□□□□□ -1.85
CDC40YDR364C ECM32P32644 1121 aaKnown RBP3.47□□□□□ -1.85
CDC40YDR364C OCT1P35999 772 aa3.47□□□□□ -1.85
CDC40YDR364C YBL029WP38201 376 aa3.47□□□□□ -1.85
CDC40YDR364C FMO1P38866 432 aa3.47□□□□□ -1.85
CDC40YDR364C GAA1P39012 614 aa3.47□□□□□ -1.85
CDC40YDR364C AXL1P40851 1208 aa3.47□□□□□ -1.85
CDC40YDR364C BST1P43571 1029 aa3.47□□□□□ -1.85
CDC40YDR364C POL31P46957 487 aa3.47□□□□□ -1.85
CDC40YDR364C FMS1P50264 508 aa3.47□□□□□ -1.85
CDC40YDR364C MTL1P53214 551 aa3.47□□□□□ -1.85
CDC40YDR364C MFM1Q02783 413 aa3.47□□□□□ -1.85
CDC40YDR364C GFD1Q04839 188 aaKnown RBP3.47□□□□□ -1.85
CDC40YDR364C HCR1Q05775 265 aaKnown RBP3.47□□□□□ -1.85
CDC40YDR364C MLH3Q12083 715 aa3.47□□□□□ -1.85
CDC40YDR364C SFI1Q12369 946 aa3.47□□□□□ -1.85
CDC40YDR364C ISA2Q12425 185 aa3.47□□□□□ -1.85
CDC40YDR364C POM34Q12445 299 aa3.47□□□□□ -1.85
CDC40YDR364C HKR1P41809 1802 aa3.47□□□□□ -1.85
CDC40YDR364C ILV1P00927 576 aaKnown RBP3.46□□□□□ -1.86
CDC40YDR364C SUI3P09064 285 aaKnown RBP3.46□□□□□ -1.86
CDC40YDR364C PET122P10355 254 aa3.46□□□□□ -1.86
CDC40YDR364C SAM1P10659 382 aaKnown RBP3.46□□□□□ -1.86
CDC40YDR364C PDX1P16451 410 aa3.46□□□□□ -1.86
CDC40YDR364C OLE1P21147 510 aaKnown RBP3.46□□□□□ -1.86
CDC40YDR364C MVD1P32377 396 aaKnown RBP3.46□□□□□ -1.86
CDC40YDR364C PHO11P35842 467 aa3.46□□□□□ -1.86
CDC40YDR364C EHT1P38295 451 aa3.46□□□□□ -1.86
CDC40YDR364C PHO12P38693 467 aa3.46□□□□□ -1.86
CDC40YDR364C LYS9P38999 446 aa3.46□□□□□ -1.86
CDC40YDR364C NUP60P39705 539 aa3.46□□□□□ -1.86
CDC40YDR364C SKP2P42843 763 aa3.46□□□□□ -1.86
CDC40YDR364C RMD8P43620 662 aa3.46□□□□□ -1.86
CDC40YDR364C ATP22P50273 684 aaPredicted RBP3.46□□□□□ -1.86
CDC40YDR364C REG1Q00816 1014 aa3.46□□□□□ -1.86
CDC40YDR364C TRS31Q03337 283 aa3.46□□□□□ -1.86
CDC40YDR364C CTK1Q03957 528 aaKnown RBP3.46□□□□□ -1.86
CDC40YDR364C TLG2Q08144 397 aa3.46□□□□□ -1.86
CDC40YDR364C LYS21Q12122 440 aaKnown RBP3.46□□□□□ -1.86
CDC40YDR364C ATP2P00830 511 aaKnown RBP3.45□□□□□ -1.86
CDC40YDR364C TUP1P16649 713 aa3.45□□□□□ -1.86
CDC40YDR364C ADE17P38009 592 aaKnown RBP3.45□□□□□ -1.86
CDC40YDR364C ERG7P38604 731 aa3.45□□□□□ -1.86
CDC40YDR364C VAB2P40003 282 aa3.45□□□□□ -1.86
CDC40YDR364C ARC1P46672 376 aaKnown RBP3.45□□□□□ -1.86
CDC40YDR364C NOP9P47077 666 aaKnown RBP3.45□□□□□ -1.86
CDC40YDR364C YML6P51998 286 aa3.45□□□□□ -1.86
CDC40YDR364C LIF1P53150 421 aa3.45□□□□□ -1.86
CDC40YDR364C YGR016WP53209 190 aa3.45□□□□□ -1.86
CDC40YDR364C BTN2P53286 410 aa3.45□□□□□ -1.86
CDC40YDR364C YSA1Q01976 231 aa3.45□□□□□ -1.86
CDC40YDR364C YPL108WQ02872 168 aaPredicted RBP3.45□□□□□ -1.86
CDC40YDR364C WAR1Q03631 944 aa3.45□□□□□ -1.86
CDC40YDR364C RAD30Q04049 632 aa3.45□□□□□ -1.86
CDC40YDR364C ENT4Q07872 247 aa3.45□□□□□ -1.86
CDC40YDR364C TMA16Q08687 178 aa3.45□□□□□ -1.86
CDC40YDR364C CDC37P06101 506 aaKnown RBP3.44□□□□□ -1.86
CDC40YDR364C TY2A-LR1P0C2J4 438 aa3.44□□□□□ -1.86
CDC40YDR364C TY2A-FP0CX61 438 aa3.44□□□□□ -1.86
CDC40YDR364C TY2A-GR2P0CX62 438 aa3.44□□□□□ -1.86
CDC40YDR364C OM45P16547 393 aa3.44□□□□□ -1.86
CDC40YDR364C CKA2P19454 339 aa3.44□□□□□ -1.86
CDC40YDR364C YCK1P23291 538 aa3.44□□□□□ -1.86
CDC40YDR364C ERG6P25087 383 aaKnown RBP3.44□□□□□ -1.86
CDC40YDR364C TY2A-CP25383 438 aa3.44□□□□□ -1.86
CDC40YDR364C FUB1P25659 250 aa3.44□□□□□ -1.86
CDC40YDR364C MRP20P32387 263 aa3.44□□□□□ -1.86
CDC40YDR364C UTR4P32626 227 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms