RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W POA1P38218 177 aa3.44□□□□□ -1.86
NUP60YAR002W FZO1P38297 855 aa3.44□□□□□ -1.86
NUP60YAR002W RIM4P38741 713 aa3.44□□□□□ -1.86
NUP60YAR002W OTU2P38747 307 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W FSH1P38777 243 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W YJL206CP39529 758 aa3.44□□□□□ -1.86
NUP60YAR002W PRM9P39551 298 aa3.44□□□□□ -1.86
NUP60YAR002W MEF2P39677 819 aa3.44□□□□□ -1.86
NUP60YAR002W YAT2P40017 923 aa3.44□□□□□ -1.86
NUP60YAR002W PEP8P40335 379 aa3.44□□□□□ -1.86
NUP60YAR002W DPH1P40487 425 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W CDC1P40986 491 aa3.44□□□□□ -1.86
NUP60YAR002W ILM1P47155 203 aa3.44□□□□□ -1.86
NUP60YAR002W RCF2P53721 224 aa3.44□□□□□ -1.86
NUP60YAR002W SLU7Q02775 382 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W TFB2Q02939 513 aa3.44□□□□□ -1.86
NUP60YAR002W ROT1Q03691 256 aa3.44□□□□□ -1.86
NUP60YAR002W FMN1Q03778 218 aa3.44□□□□□ -1.86
NUP60YAR002W AIM32Q04689 311 aa3.44□□□□□ -1.86
NUP60YAR002W GTB1Q04924 702 aa3.44□□□□□ -1.86
NUP60YAR002W HRD3Q05787 833 aa3.44□□□□□ -1.86
NUP60YAR002W YSH1Q06224 779 aaPredicted RBP3.44□□□□□ -1.86
NUP60YAR002W CDA1Q06702 301 aa3.44□□□□□ -1.86
NUP60YAR002W AAD15Q08361 143 aa3.44□□□□□ -1.86
NUP60YAR002W SPE3Q12074 293 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W PKH2Q12236 1081 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W KCS1Q12494 1050 aa3.44□□□□□ -1.86
NUP60YAR002W NOT5Q12514 560 aaPredicted RBP3.44□□□□□ -1.86
NUP60YAR002W MDM12Q92328 271 aa3.44□□□□□ -1.86
NUP60YAR002W HAP2P06774 265 aa3.43□□□□□ -1.86
NUP60YAR002W MET16P18408 261 aaPredicted RBP3.43□□□□□ -1.86
NUP60YAR002W YCL068CP25593 260 aa3.43□□□□□ -1.86
NUP60YAR002W POT1P27796 417 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
NUP60YAR002W SMI1P32566 505 aa3.43□□□□□ -1.86
NUP60YAR002W SPC29P33419 253 aa3.43□□□□□ -1.86
NUP60YAR002W PEX6P33760 1030 aa3.43□□□□□ -1.86
NUP60YAR002W PEX5P35056 612 aa3.43□□□□□ -1.86
NUP60YAR002W RIM2P38127 377 aa3.43□□□□□ -1.86
NUP60YAR002W CRP1P38845 465 aaKnown RBP3.43□□□□□ -1.86
NUP60YAR002W MNN1P39106 762 aa3.43□□□□□ -1.86
NUP60YAR002W ATM1P40416 690 aa3.43□□□□□ -1.86
NUP60YAR002W GYP8P43570 497 aa3.43□□□□□ -1.86
NUP60YAR002W FAR3P46671 204 aa3.43□□□□□ -1.86
NUP60YAR002W GUF1P46943 645 aa3.43□□□□□ -1.86
NUP60YAR002W YJL132WP47014 750 aa3.43□□□□□ -1.86
NUP60YAR002W RNR4P49723 345 aaKnown RBP3.43□□□□□ -1.86
NUP60YAR002W MAL11P53048 616 aa3.43□□□□□ -1.86
NUP60YAR002W LGE1Q02796 332 aaKnown RBP3.43□□□□□ -1.86
NUP60YAR002W ATP25Q03153 612 aa3.43□□□□□ -1.86
NUP60YAR002W YMR209CQ03648 457 aa3.43□□□□□ -1.86
NUP60YAR002W PLB2Q03674 706 aa3.43□□□□□ -1.86
NUP60YAR002W ARA2Q04212 335 aa3.43□□□□□ -1.86
NUP60YAR002W SPG3Q04398 127 aaPredicted RBP3.43□□□□□ -1.86
NUP60YAR002W YDR514CQ04408 483 aa3.43□□□□□ -1.86
NUP60YAR002W GRX8Q05926 109 aa3.43□□□□□ -1.86
NUP60YAR002W REH1Q06709 432 aa3.43□□□□□ -1.86
NUP60YAR002W ADY3Q07732 790 aa3.43□□□□□ -1.86
NUP60YAR002W ARP7Q12406 477 aa3.43□□□□□ -1.86
NUP60YAR002W RPS9AO13516 197 aaKnown RBP3.42□□□□□ -1.86
NUP60YAR002W HEM1P09950 548 aaPredicted RBP3.42□□□□□ -1.86
NUP60YAR002W GCY1P14065 312 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
NUP60YAR002W EXO70P19658 623 aa3.42□□□□□ -1.86
NUP60YAR002W GAS1P22146 559 aaKnown RBP3.42□□□□□ -1.86
NUP60YAR002W SEC14P24280 304 aaKnown RBP3.42□□□□□ -1.86
NUP60YAR002W SNT1P25357 1226 aa3.42□□□□□ -1.86
NUP60YAR002W YIH1P25637 258 aa3.42□□□□□ -1.86
NUP60YAR002W HRR25P29295 494 aaKnown RBP3.42□□□□□ -1.86
NUP60YAR002W NDI1P32340 513 aa3.42□□□□□ -1.86
NUP60YAR002W HEM12P32347 362 aaPredicted RBP3.42□□□□□ -1.86
NUP60YAR002W RIM1P32445 135 aaKnown RBP3.42□□□□□ -1.86
NUP60YAR002W SEC6P32844 805 aa3.42□□□□□ -1.86
NUP60YAR002W UIP5P36137 443 aa3.42□□□□□ -1.86
NUP60YAR002W PHO89P38361 574 aa3.42□□□□□ -1.86
NUP60YAR002W STN1P38960 494 aa3.42□□□□□ -1.86
NUP60YAR002W YDR089WP38966 869 aa3.42□□□□□ -1.86
NUP60YAR002W FHL1P39521 936 aa3.42□□□□□ -1.86
NUP60YAR002W YEL028WP39989 153 aa3.42□□□□□ -1.86
NUP60YAR002W AXL1P40851 1208 aa3.42□□□□□ -1.86
NUP60YAR002W CHS6P40955 746 aa3.42□□□□□ -1.86
NUP60YAR002W ARC1P46672 376 aaKnown RBP3.42□□□□□ -1.86
NUP60YAR002W TAF1P46677 1066 aa3.42□□□□□ -1.86
NUP60YAR002W RPS10BP46784 105 aaKnown RBP3.42□□□□□ -1.86
NUP60YAR002W MAD3P47074 515 aa3.42□□□□□ -1.86
NUP60YAR002W MRM2P53123 320 aa3.42□□□□□ -1.86
NUP60YAR002W VPS62P53285 467 aa3.42□□□□□ -1.86
NUP60YAR002W YNL058CP53947 316 aa3.42□□□□□ -1.86
NUP60YAR002W RNY1Q02933 434 aaKnown RBP3.42□□□□□ -1.86
NUP60YAR002W GCN5Q03330 439 aa3.42□□□□□ -1.86
NUP60YAR002W TVP15Q03860 143 aa3.42□□□□□ -1.86
NUP60YAR002W TAF11Q04226 346 aa3.42□□□□□ -1.86
NUP60YAR002W ARP9Q05123 467 aa3.42□□□□□ -1.86
NUP60YAR002W CDC123Q05791 360 aa3.42□□□□□ -1.86
NUP60YAR002W RXT3Q07458 294 aa3.42□□□□□ -1.86
NUP60YAR002W NTG2Q08214 380 aa3.42□□□□□ -1.86
NUP60YAR002W GPN2Q08726 347 aaPredicted RBP3.42□□□□□ -1.86
NUP60YAR002W RPS10AQ08745 105 aaPredicted RBP3.42□□□□□ -1.86
NUP60YAR002W GPB1Q08886 897 aa3.42□□□□□ -1.86
NUP60YAR002W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86 RIP-Chip
NUP60YAR002W LDB17Q12342 491 aa3.42□□□□□ -1.86
NUP60YAR002W YDR524C-BQ3E6R4 66 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms