RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 COL9A3Q14050 684 aaPredicted RBP15□□□□□ -0.01
PHGDH-220ENST00000641570 ANKRD23Q86SG2 305 aa15□□□□□ -0.01
PHGDH-220ENST00000641570 SIAH1Q8IUQ4 282 aa15□□□□□ -0.01
PHGDH-220ENST00000641570 PRPF38AQ8NAV1 312 aaKnown RBP15□□□□□ -0.01
PHGDH-220ENST00000641570 CCDC12Q8WUD4 166 aaPredicted RBP15□□□□□ -0.01
PHGDH-220ENST00000641570 PIBF1Q8WXW3 757 aa15□□□□□ -0.01
PHGDH-220ENST00000641570 OTOFQ9HC10 1997 aa15□□□□□ -0.01
PHGDH-220ENST00000641570 NID2Q14112 1375 aa14.99□□□□□ -0.01
PHGDH-220ENST00000641570 PALM3A6NDB9 673 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-220ENST00000641570 ALDH1A1P00352 501 aa14.99□□□□□ -0.01
PHGDH-220ENST00000641570 ADD1P35611 737 aaKnown RBP14.99□□□□□ -0.01
PHGDH-220ENST00000641570 C1QTNF8P60827 252 aa14.99□□□□□ -0.01
PHGDH-220ENST00000641570 COG2Q14746 738 aa14.99□□□□□ -0.01
PHGDH-220ENST00000641570 BEGAINQ9BUH8 593 aa14.99□□□□□ -0.01
PHGDH-220ENST00000641570 UBA5Q9GZZ9 404 aa14.99□□□□□ -0.01
PHGDH-220ENST00000641570 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
PHGDH-220ENST00000641570 GREB1LQ9C091 1923 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-220ENST00000641570 MYPNQ86TC9 1320 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 PTPDC1A2A3K4 754 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 PDHXO00330 501 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 PLA2G6O60733 806 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 PLEKHA8P1O95397 391 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 CD2BP2O95400 341 aaKnown RBP14.98□□□□□ -0.01
PHGDH-220ENST00000641570 DEXIO95424 95 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 HSPA6P17066 643 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 IFNAR1P17181 557 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 SMARCA1P28370 1054 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 SLC16A2P36021 539 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 GJA5P36382 358 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 SLC4A3P48751 1232 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 GNL2Q13823 731 aaKnown RBP14.98□□□□□ -0.01
PHGDH-220ENST00000641570 PLS1Q14651 629 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 CATSPERGQ6ZRH7 1159 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 STAG2Q8N3U4 1231 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 MB21D1Q8N884 522 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 DDX11Q96FC9 970 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 SPZ1Q9BXG8 430 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
PHGDH-220ENST00000641570 BRMS1Q9HCU9 246 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 ORC3Q9UBD5 711 aaPredicted RBP14.98□□□□□ -0.01
PHGDH-220ENST00000641570 PPP1R9AQ9ULJ8 1098 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 HPS5Q9UPZ3 1129 aa14.98□□□□□ -0.01
PHGDH-220ENST00000641570 H3BQV1 296 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 LARGE1O95461 756 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 PDCP20941 246 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 CDC27P30260 824 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 DGKZQ13574 1117 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 TAF1CQ15572 869 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-220ENST00000641570 CDC37Q16543 378 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-220ENST00000641570 TREML2Q5T2D2 321 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 IFFO2Q5TF58 517 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 CCDC174Q6PII3 467 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 HEATR3Q7Z4Q2 680 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 ADGRF4Q8IZF3 695 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 PHKBQ93100 1093 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 INTS4Q96HW7 963 aaKnown RBP14.97□□□□□ -0.01
PHGDH-220ENST00000641570 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 ZFYVE28Q9HCC9 887 aa14.97□□□□□ -0.01
PHGDH-220ENST00000641570 ZCCHC17Q9NP64 241 aaKnown RBP14.97□□□□□ -0.01
PHGDH-220ENST00000641570 WDR33Q9C0J8 1336 aaKnown RBP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 MYH4Q9Y623 1939 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 BTBD19C9JJ37 291 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 hCG_1984214I3L0E3 225 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 ZBTB5O15062 677 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 FMNL1O95466 1100 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 HOXA7P31268 230 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 CCNA1P78396 465 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 KIF23Q02241 960 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 SAFBQ15424 915 aaKnown RBP eCLIP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 TTBK2Q6IQ55 1244 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 RASGRP2Q7LDG7 609 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 FBXO11Q86XK2 927 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 CMTR1Q8N1G2 835 aaKnown RBP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 SRBD1Q8N5C6 995 aaKnown RBP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 ZNF713Q8N859 430 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 BRI3BPQ8WY22 251 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 ASCC2Q9H1I8 757 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-220ENST00000641570 PRR12Q9ULL5 1215 aa14.96□□□□□ -0.01
PHGDH-220ENST00000641570 CNTNAP5Q8WYK1 1306 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 STK36Q9NRP7 1315 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 PRPF3O43395 683 aaKnown RBP14.95□□□□□ -0.02
PHGDH-220ENST00000641570 GJB2P29033 226 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 DSG3P32926 999 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 COPB2P35606 906 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 MAP2K2P36507 400 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 GCLCP48506 637 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-220ENST00000641570 HERVK_113P62684 666 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 BTNL9Q6UXG8 535 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 MS4A4AQ96JQ5 239 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 PIGSQ96S52 555 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 AMNQ9BXJ7 453 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 CCPG1Q9ULG6 757 aa14.95□□□□□ -0.02
PHGDH-220ENST00000641570 V9GY48 417 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-220ENST00000641570 PPFIA3O75145 1194 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 SCG2P13521 617 aa14.94□□□□□ -0.02
PHGDH-220ENST00000641570 NAPAP54920 295 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms