RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 GTF3C6Q969F1 213 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 KIFC2Q96AC6 838 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 RRP36Q96EU6 259 aaKnown RBP15.03■□□□□ -0
PHGDH-218ENST00000641491 TMX3Q96JJ7 454 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 C12orf42Q96LP6 360 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 SLF1Q9BQI6 1058 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 SENP2Q9HC62 589 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 CWC22Q9HCG8 908 aaKnown RBP15.03■□□□□ -0
PHGDH-218ENST00000641491 AGTPBP1Q9UPW5 1226 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 SMC3Q9UQE7 1217 aa15.03■□□□□ -0
PHGDH-218ENST00000641491 RBM19Q9Y4C8 960 aaKnown RBP15.03■□□□□ -0
PHGDH-218ENST00000641491 ATAD5Q96QE3 1844 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 ZBED4O75132 1171 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 HMGN5P82970 282 aaKnown RBP15.02■□□□□ -0
PHGDH-218ENST00000641491 TROAPQ12815 778 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 TRIM29Q14134 588 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 ME3Q16798 604 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 SYDE2Q5VT97 1194 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 CCDC82Q8N4S0 544 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 NECAB1Q8N987 351 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
PHGDH-218ENST00000641491 PARK7Q99497 189 aaKnown RBP15.02■□□□□ -0
PHGDH-218ENST00000641491 NUP88Q99567 741 aaPredicted RBP15.02■□□□□ -0
PHGDH-218ENST00000641491 PNMA2Q9UL42 364 aa15.02■□□□□ -0
PHGDH-218ENST00000641491 FDX1P10109 184 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 EVCP57679 992 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 SCRN1Q12765 414 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 TMTC3Q6ZXV5 915 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 HOMER1Q86YM7 354 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 CCAR1Q8IX12 1150 aaKnown RBP15.01□□□□□ -0.01
PHGDH-218ENST00000641491 LLPHQ9BRT6 129 aaKnown RBP15.01□□□□□ -0.01
PHGDH-218ENST00000641491 SLC26A6Q9BXS9 759 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 NCOA5Q9HCD5 579 aaKnown RBP15.01□□□□□ -0.01
PHGDH-218ENST00000641491 VAT1LQ9HCJ6 419 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 EMILIN3Q9NT22 766 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 HOXC10Q9NYD6 342 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 MAD2L2Q9UI95 211 aa15.01□□□□□ -0.01
PHGDH-218ENST00000641491 SNHG28P0DPA3 235 aa15□□□□□ -0.01
PHGDH-218ENST00000641491 COL9A3Q14050 684 aaPredicted RBP15□□□□□ -0.01
PHGDH-218ENST00000641491 ANKRD23Q86SG2 305 aa15□□□□□ -0.01
PHGDH-218ENST00000641491 SIAH1Q8IUQ4 282 aa15□□□□□ -0.01
PHGDH-218ENST00000641491 PRPF38AQ8NAV1 312 aaKnown RBP15□□□□□ -0.01
PHGDH-218ENST00000641491 CCDC12Q8WUD4 166 aaPredicted RBP15□□□□□ -0.01
PHGDH-218ENST00000641491 PIBF1Q8WXW3 757 aa15□□□□□ -0.01
PHGDH-218ENST00000641491 OTOFQ9HC10 1997 aa15□□□□□ -0.01
PHGDH-218ENST00000641491 TNRC18O15417 2968 aaPredicted RBP15□□□□□ -0.01
PHGDH-218ENST00000641491 NID2Q14112 1375 aa14.99□□□□□ -0.01
PHGDH-218ENST00000641491 PALM3A6NDB9 673 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-218ENST00000641491 ALDH1A1P00352 501 aa14.99□□□□□ -0.01
PHGDH-218ENST00000641491 ADD1P35611 737 aaKnown RBP14.99□□□□□ -0.01
PHGDH-218ENST00000641491 COG2Q14746 738 aa14.99□□□□□ -0.01
PHGDH-218ENST00000641491 UBA5Q9GZZ9 404 aa14.99□□□□□ -0.01
PHGDH-218ENST00000641491 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
PHGDH-218ENST00000641491 GREB1LQ9C091 1923 aaPredicted RBP14.99□□□□□ -0.01
PHGDH-218ENST00000641491 MYPNQ86TC9 1320 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 PTPDC1A2A3K4 754 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 PDHXO00330 501 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 PLA2G6O60733 806 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 PLEKHA8P1O95397 391 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 CD2BP2O95400 341 aaKnown RBP14.98□□□□□ -0.01
PHGDH-218ENST00000641491 DEXIO95424 95 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 IFNAR1P17181 557 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 SMARCA1P28370 1054 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 SLC16A2P36021 539 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 GJA5P36382 358 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 SLC4A3P48751 1232 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 GNL2Q13823 731 aaKnown RBP14.98□□□□□ -0.01
PHGDH-218ENST00000641491 PLS1Q14651 629 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 PRPF38BQ5VTL8 546 aaKnown RBP14.98□□□□□ -0.01
PHGDH-218ENST00000641491 CATSPERGQ6ZRH7 1159 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 STAG2Q8N3U4 1231 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 MB21D1Q8N884 522 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 DDX11Q96FC9 970 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 SPZ1Q9BXG8 430 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
PHGDH-218ENST00000641491 BRMS1Q9HCU9 246 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 ORC3Q9UBD5 711 aaPredicted RBP14.98□□□□□ -0.01
PHGDH-218ENST00000641491 PPP1R9AQ9ULJ8 1098 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 HPS5Q9UPZ3 1129 aa14.98□□□□□ -0.01
PHGDH-218ENST00000641491 H3BQV1 296 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 LARGE1O95461 756 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 PDCP20941 246 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 CDC27P30260 824 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 TAF1CQ15572 869 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-218ENST00000641491 CDC37Q16543 378 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-218ENST00000641491 TREML2Q5T2D2 321 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 CCDC174Q6PII3 467 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 HEATR3Q7Z4Q2 680 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 ADGRF4Q8IZF3 695 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 PHKBQ93100 1093 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 INTS4Q96HW7 963 aaKnown RBP14.97□□□□□ -0.01
PHGDH-218ENST00000641491 PAGR1Q9BTK6 254 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 ZFYVE28Q9HCC9 887 aa14.97□□□□□ -0.01
PHGDH-218ENST00000641491 ZCCHC17Q9NP64 241 aaKnown RBP14.97□□□□□ -0.01
PHGDH-218ENST00000641491 MYH4Q9Y623 1939 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 BTBD19C9JJ37 291 aa14.96□□□□□ -0.01
PHGDH-218ENST00000641491 hCG_1984214I3L0E3 225 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms