RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 USP31Q70CQ4 1352 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 SPOPO43791 374 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 IL6STP40189 918 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-210ENST00000638567 TRAPPC10P48553 1259 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 PEX26Q7Z412 305 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 DAAM2Q86T65 1068 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 MB21D2Q8IYB1 491 aaPredicted RBP18.46■□□□□ 0.55
SCARB2-210ENST00000638567 OGFOD1Q8N543 542 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 CNOT6LQ96LI5 555 aaKnown RBP18.46■□□□□ 0.55
SCARB2-210ENST00000638567 LSM14BQ9BX40 385 aaKnown RBP18.46■□□□□ 0.55
SCARB2-210ENST00000638567 WDR17Q8IZU2 1322 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
SCARB2-210ENST00000638567 PTPREP23469 700 aa18.46■□□□□ 0.54
SCARB2-210ENST00000638567 CYB5R4Q7L1T6 521 aa18.46■□□□□ 0.54
SCARB2-210ENST00000638567 PPM1EQ8WY54 764 aa18.46■□□□□ 0.54
SCARB2-210ENST00000638567 IQCDQ96DY2 449 aa18.46■□□□□ 0.54
SCARB2-210ENST00000638567 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 TCP1P17987 556 aaKnown RBP18.45■□□□□ 0.54
SCARB2-210ENST00000638567 NUCKS1Q9H1E3 243 aaKnown RBP18.45■□□□□ 0.54
SCARB2-210ENST00000638567 MED4Q9NPJ6 270 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 SAMD15Q9P1V8 674 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 CASP1P29466 404 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 DHX40Q8IX18 779 aaKnown RBP18.45■□□□□ 0.54
SCARB2-210ENST00000638567 VEZTQ9HBM0 779 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 IKBKGQ9Y6K9 419 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 VIMP08670 466 aaKnown RBP18.45■□□□□ 0.54
SCARB2-210ENST00000638567 ACTN2P35609 894 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 KMT5BQ4FZB7 885 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 PAGE5Q96GU1 130 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 NAP1L3Q99457 506 aaPredicted RBP18.45■□□□□ 0.54
SCARB2-210ENST00000638567 NRKQ7Z2Y5 1582 aa18.45■□□□□ 0.54
SCARB2-210ENST00000638567 A6NNZ2 444 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 CALUO43852 315 aaPredicted RBP18.44■□□□□ 0.54
SCARB2-210ENST00000638567 PCP11498 1178 aaKnown RBP18.44■□□□□ 0.54
SCARB2-210ENST00000638567 TUBB8Q3ZCM7 444 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 SEL1L2Q5TEA6 688 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 FAM71BQ8TC56 605 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 UTP11Q9Y3A2 253 aaKnown RBP18.44■□□□□ 0.54
SCARB2-210ENST00000638567 PCDHB13Q9Y5F0 798 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 IQCB1Q15051 598 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 MFSD14BQ5SR56 506 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 RUFY4Q6ZNE9 571 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 TCHPQ9BT92 498 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 ATP8A2Q9NTI2 1148 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 FRMPD2Q68DX3 1309 aaPredicted RBP18.44■□□□□ 0.54
SCARB2-210ENST00000638567 GCNT3O95395 438 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 GNGT1P63211 74 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 TERF2Q15554 542 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 CERS3Q8IU89 383 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 PAF1Q8N7H5 531 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 GLT8D2Q9H1C3 349 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 CPS1P31327 1500 aa18.44■□□□□ 0.54
SCARB2-210ENST00000638567 SF3B2Q13435 895 aaKnown RBP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 RBM17Q96I25 401 aaKnown RBP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 MYO1AQ9UBC5 1043 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 PCDHA12Q9UN75 941 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 REREQ9P2R6 1566 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 LOC102724428A0A0B4J2F2 783 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 VGLL3A8MV65 326 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 ACTN4O43707 911 aaKnown RBP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 EEF1GP26641 437 aaKnown RBP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 ATP1A2P50993 1020 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 SIK1P57059 783 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 USH1GQ495M9 461 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 MAEAQ7L5Y9 396 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 FAM204AQ9H8W3 233 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 FAN1Q9Y2M0 1017 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 CDC27P30260 824 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 SF3A3Q12874 501 aaKnown RBP eCLIP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 FMNL3Q8IVF7 1028 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 NT5C3AQ9H0P0 336 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 MRPL44Q9H9J2 332 aaKnown RBP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 KCNK3O14649 394 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 POLR2FP61218 127 aaKnown RBP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 SCARF1Q14162 830 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 HLFQ16534 295 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 GPBP1Q86WP2 473 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 LRRC47Q8N1G4 583 aaKnown RBP18.43■□□□□ 0.54
SCARB2-210ENST00000638567 BCAS4Q8TDM0 211 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 CTTNBP2NLQ9P2B4 639 aa18.43■□□□□ 0.54
SCARB2-210ENST00000638567 KRT71Q3SY84 523 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 ZNF658Q5TYW1 1059 aaPredicted RBP18.42■□□□□ 0.54
SCARB2-210ENST00000638567 TOGARAM2Q6ZUX3 1019 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 GOLGA5Q8TBA6 731 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 FBF1Q8TES7 1133 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 PIGBQ92521 554 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 CABS1Q96KC9 395 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 PANX2Q96RD6 677 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 NEDD4P46934 1319 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 SP4Q02446 784 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 TCP10Q12799 353 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 GALNT17Q6IS24 598 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 KIF28PB7ZC32 967 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 EXOSC10Q01780 885 aaKnown RBP18.42■□□□□ 0.54
SCARB2-210ENST00000638567 FAM98CQ17RN3 349 aaKnown RBP18.42■□□□□ 0.54
SCARB2-210ENST00000638567 FAM26FQ5R3K3 315 aa18.42■□□□□ 0.54
SCARB2-210ENST00000638567 MYCT1Q8N699 235 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms