RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 CWC27Q6UX04 472 aaKnown RBP17.53■□□□□ 0.4
KCNMA1-229ENST00000638249 ABRAQ8N0Z2 381 aa17.53■□□□□ 0.4
KCNMA1-229ENST00000638249 ANKLE1Q8NAG6 615 aa17.53■□□□□ 0.4
KCNMA1-229ENST00000638249 DPF3Q92784 378 aa17.53■□□□□ 0.4
KCNMA1-229ENST00000638249 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
KCNMA1-229ENST00000638249 HTATIP2Q9BUP3 242 aa17.53■□□□□ 0.4
KCNMA1-229ENST00000638249 FCER1AP12319 257 aa17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 BMP3P12645 472 aa17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 SNRNP48Q6IEG0 339 aaKnown RBP17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 PRPF38AQ8NAV1 312 aaKnown RBP17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 GMCL1Q96IK5 515 aa17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 MMP19Q99542 508 aa17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 TEX13BQ9BXU2 312 aa17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 SLC38A10Q9HBR0 1119 aa17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 PCDH10Q9P2E7 1040 aa17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 NEDD4P46934 1319 aa17.52■□□□□ 0.39
KCNMA1-229ENST00000638249 SZT2Q5T011 3432 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 LAMA3Q16787 3333 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 CAPN2P17655 700 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 RRP12Q5JTH9 1297 aaKnown RBP17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 PRAMEF19Q5SWL8 479 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 TTC22Q5TAA0 569 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 NECAB2Q7Z6G3 386 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 CPXCR1Q8N123 301 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 RAVER2Q9HCJ3 691 aaKnown RBP17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 DIAPH3Q9NSV4 1193 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 DDX20Q9UHI6 824 aaKnown RBP17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 FEM1BQ9UK73 627 aa17.51■□□□□ 0.39
KCNMA1-229ENST00000638249 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 ATP2A1O14983 1001 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 SLC34A2O95436 690 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 LCTP09848 1927 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 COL6A1P12109 1028 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 MCCP23508 829 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 ZNF792Q3KQV3 632 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 KCTD1Q719H9 257 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 STAG1Q8WVM7 1258 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 TOMM22Q9NS69 142 aa17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 COLQQ9Y215 455 aaPredicted RBP17.5■□□□□ 0.39
KCNMA1-229ENST00000638249 ZNF536O15090 1300 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 TAL1P17542 331 aaPredicted RBP17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 CNGA1P29973 690 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 SLC1A4P43007 532 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 STAT2P52630 851 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 HABP4Q5JVS0 413 aaKnown RBP17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 AKNAD1Q5T1N1 836 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 ANO1Q5XXA6 986 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 RCSD1Q6JBY9 416 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 C11orf49Q9H6J7 331 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 TRIOBPQ9H2D6 2365 aa17.49■□□□□ 0.39
KCNMA1-229ENST00000638249 LRRC37A2A6NM11 1700 aa17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 SMCHD1A6NHR9 2005 aa17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 MCM3APO60318 1980 aa17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 SLC4A3P48751 1232 aa17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 SNAP25P60880 206 aa17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 KCTD2Q14681 263 aa17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 FGD4Q96M96 766 aa17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 TMEM47Q9BQJ4 181 aa17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 ISY1Q9ULR0 285 aaKnown RBP17.48■□□□□ 0.39
KCNMA1-229ENST00000638249 DNAJC25-GNG10A0A024R161 153 aa17.47■□□□□ 0.39
KCNMA1-229ENST00000638249 ZBED4O75132 1171 aa17.47■□□□□ 0.39
KCNMA1-229ENST00000638249 COPB2P35606 906 aa17.47■□□□□ 0.39
KCNMA1-229ENST00000638249 MFAP1P55081 439 aaKnown RBP17.47■□□□□ 0.39
KCNMA1-229ENST00000638249 TTBK2Q6IQ55 1244 aa17.47■□□□□ 0.39
KCNMA1-229ENST00000638249 CHRDL2Q6WN34 429 aa17.47■□□□□ 0.39
KCNMA1-229ENST00000638249 TCP11L1Q9NUJ3 509 aa17.47■□□□□ 0.39
KCNMA1-229ENST00000638249 EVI5O60447 810 aa17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 C7orf61Q8IZ16 206 aa17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 AGBL1Q96MI9 1066 aa17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 TINF2Q9BSI4 451 aa17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 DSCC1Q9BVC3 393 aa17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 PRO3102Q9H379 93 aa17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
KCNMA1-229ENST00000638249 HIP1O00291 1037 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 SEPT4O43236 478 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 PLA2G6O60733 806 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 OAZ1P54368 228 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 MFSD6Q6ZSS7 791 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 LENG1Q96BZ8 264 aaPredicted RBP17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 HOMER2Q9NSB8 354 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 SLC5A4Q9NY91 659 aa17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 DIS3Q9Y2L1 958 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-229ENST00000638249 FRMPD2Q68DX3 1309 aaPredicted RBP17.44■□□□□ 0.38
KCNMA1-229ENST00000638249 MSCO60682 206 aa17.44■□□□□ 0.38
KCNMA1-229ENST00000638249 TOP1P11387 765 aaKnown RBP17.44■□□□□ 0.38
KCNMA1-229ENST00000638249 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
KCNMA1-229ENST00000638249 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
KCNMA1-229ENST00000638249 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
KCNMA1-229ENST00000638249 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
KCNMA1-229ENST00000638249 NR2E3Q9Y5X4 410 aa17.44■□□□□ 0.38
KCNMA1-229ENST00000638249 ZNF213O14771 459 aa17.43■□□□□ 0.38
KCNMA1-229ENST00000638249 ZNF865P0CJ78 1059 aaPredicted RBP17.43■□□□□ 0.38
KCNMA1-229ENST00000638249 PDHBP11177 359 aa17.43■□□□□ 0.38
KCNMA1-229ENST00000638249 PCP11498 1178 aaKnown RBP17.43■□□□□ 0.38
KCNMA1-229ENST00000638249 SLC16A2P36021 539 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms