RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 SSBP05455 408 aaKnown RBP eCLIP10.12□□□□□ -0.79
LINC01108-202ENST00000635227 CLCN7P51798 805 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 ZNF574Q6ZN55 896 aaPredicted RBP10.12□□□□□ -0.79
LINC01108-202ENST00000635227 SPRED2Q7Z698 418 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 VSIG10LQ86VR7 867 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 OR6P1Q8NGX9 317 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 GMLQ99445 158 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 SEMA3GQ9NS98 782 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 VAV3Q9UKW4 847 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 ANGEL1Q9UNK9 670 aaKnown RBP10.12□□□□□ -0.79
LINC01108-202ENST00000635227 FGD6Q6ZV73 1430 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 PHLDB1Q86UU1 1377 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 GCC2Q8IWJ2 1684 aa10.12□□□□□ -0.79
LINC01108-202ENST00000635227 SETD1BQ9UPS6 1966 aaKnown RBP10.12□□□□□ -0.79
LINC01108-202ENST00000635227 NCOA2Q15596 1464 aa10.11□□□□□ -0.79
LINC01108-202ENST00000635227 PITPNM2Q9BZ72 1349 aa10.11□□□□□ -0.79
LINC01108-202ENST00000635227 MYOM3Q5VTT5 1437 aa10.11□□□□□ -0.79
LINC01108-202ENST00000635227 WNT11O96014 354 aa10.11□□□□□ -0.79
LINC01108-202ENST00000635227 TTC6Q86TZ1 520 aa10.11□□□□□ -0.79
LINC01108-202ENST00000635227 PIWIL2Q8TC59 973 aaKnown RBP10.11□□□□□ -0.79
LINC01108-202ENST00000635227 MISP3Q96FF7 219 aa10.11□□□□□ -0.79
LINC01108-202ENST00000635227 SLC5A6Q9Y289 635 aa10.11□□□□□ -0.79
LINC01108-202ENST00000635227 ZNF335Q9H4Z2 1342 aaPredicted RBP10.1□□□□□ -0.79
LINC01108-202ENST00000635227 LTBP3Q9NS15 1303 aa10.1□□□□□ -0.79
LINC01108-202ENST00000635227 C8orf37Q96NL8 207 aa10.1□□□□□ -0.79
LINC01108-202ENST00000635227 KCNH3Q9ULD8 1083 aa10.1□□□□□ -0.79
LINC01108-202ENST00000635227 DHX57Q6P158 1386 aaKnown RBP10.1□□□□□ -0.79
LINC01108-202ENST00000635227 SETD5Q9C0A6 1442 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 KDM5BQ9UGL1 1544 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 A0A1W2PQH9 124 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 WASH4PA8MWX3 477 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 C9IYK1 514 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 CD8BP10966 210 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 ETFBP38117 255 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 RNF4P78317 190 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 PPP2R5EQ16537 467 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 TDRD10Q5VZ19 366 aaKnown RBP10.09□□□□□ -0.79
LINC01108-202ENST00000635227 STK11IPQ8N1F8 1099 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 FLCNQ8NFG4 579 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 DUSP15Q9H1R2 295 aaPredicted RBP10.09□□□□□ -0.79
LINC01108-202ENST00000635227 SUCOQ9UBS9 1254 aaKnown RBP10.09□□□□□ -0.79
LINC01108-202ENST00000635227 ABCA8O94911 1581 aa10.09□□□□□ -0.79
LINC01108-202ENST00000635227 ZCCHC11Q5TAX3 1644 aaKnown RBP10.08□□□□□ -0.8
LINC01108-202ENST00000635227 PPFIBP1Q86W92 1011 aa10.08□□□□□ -0.8
LINC01108-202ENST00000635227 C19orf47Q8N9M1 422 aaKnown RBP10.08□□□□□ -0.8
LINC01108-202ENST00000635227 ASB11Q8WXH4 323 aa10.08□□□□□ -0.8
LINC01108-202ENST00000635227 UBE2FQ969M7 185 aa10.08□□□□□ -0.8
LINC01108-202ENST00000635227 DHRS1Q96LJ7 313 aa10.08□□□□□ -0.8
LINC01108-202ENST00000635227 ATP13A1Q9HD20 1204 aa10.08□□□□□ -0.8
LINC01108-202ENST00000635227 PAK6Q9NQU5 681 aaPredicted RBP10.08□□□□□ -0.8
LINC01108-202ENST00000635227 ZSWIM5Q9P217 1185 aa10.08□□□□□ -0.8
LINC01108-202ENST00000635227 SHISA3A0PJX4 238 aa10.07□□□□□ -0.8
LINC01108-202ENST00000635227 SRFP11831 508 aa10.07□□□□□ -0.8
LINC01108-202ENST00000635227 PMS1P54277 932 aaKnown RBP10.07□□□□□ -0.8
LINC01108-202ENST00000635227 SNW1Q13573 536 aaKnown RBP10.07□□□□□ -0.8
LINC01108-202ENST00000635227 FAM50AQ14320 339 aaKnown RBP10.07□□□□□ -0.8
LINC01108-202ENST00000635227 NBPF9Q3BBW0 867 aa10.07□□□□□ -0.8
LINC01108-202ENST00000635227 GPR62Q9BZJ7 368 aa10.07□□□□□ -0.8
LINC01108-202ENST00000635227 MKRN2Q9H000 416 aaKnown RBP10.07□□□□□ -0.8
LINC01108-202ENST00000635227 ZNF408Q9H9D4 720 aa10.07□□□□□ -0.8
LINC01108-202ENST00000635227 FAM86C1Q9NVL1 165 aa10.07□□□□□ -0.8
LINC01108-202ENST00000635227 UHRF1BP1Q6BDS2 1440 aa10.07□□□□□ -0.8
LINC01108-202ENST00000635227 RAB3GAP2Q9H2M9 1393 aa10.06□□□□□ -0.8
LINC01108-202ENST00000635227 SMAD7O15105 426 aaKnown RBP10.06□□□□□ -0.8
LINC01108-202ENST00000635227 TOM1O60784 492 aa10.06□□□□□ -0.8
LINC01108-202ENST00000635227 CASP7P55210 303 aa10.06□□□□□ -0.8
LINC01108-202ENST00000635227 ZNF214Q9UL59 606 aaPredicted RBP10.06□□□□□ -0.8
LINC01108-202ENST00000635227 PCDHB10Q9UN67 800 aa10.06□□□□□ -0.8
LINC01108-202ENST00000635227 MIA2Q96PC5 1412 aa10.06□□□□□ -0.8
LINC01108-202ENST00000635227 TCOF1Q13428 1488 aaKnown RBP10.05□□□□□ -0.8
LINC01108-202ENST00000635227 WDR7Q9Y4E6 1490 aa10.05□□□□□ -0.8
LINC01108-202ENST00000635227 SIGLEC1Q9BZZ2 1709 aa10.05□□□□□ -0.8
LINC01108-202ENST00000635227 GP2P55259 537 aaKnown RBP10.05□□□□□ -0.8
LINC01108-202ENST00000635227 TMC3Q7Z5M5 1100 aa10.05□□□□□ -0.8
LINC01108-202ENST00000635227 THAP5Q7Z6K1 395 aa10.05□□□□□ -0.8
LINC01108-202ENST00000635227 TP53INP2Q8IXH6 220 aa10.05□□□□□ -0.8
LINC01108-202ENST00000635227 ADGBQ8N7X0 1667 aa10.05□□□□□ -0.8
LINC01108-202ENST00000635227 CDK13Q14004 1512 aaKnown RBP10.04□□□□□ -0.8
LINC01108-202ENST00000635227 RAPGEF3O95398 923 aa10.04□□□□□ -0.8
LINC01108-202ENST00000635227 TP53P04637 393 aaPredicted RBP10.04□□□□□ -0.8
LINC01108-202ENST00000635227 IKZF1Q13422 519 aa10.04□□□□□ -0.8
LINC01108-202ENST00000635227 PRDM14Q9GZV8 571 aa10.04□□□□□ -0.8
LINC01108-202ENST00000635227 CDK11AQ9UQ88 783 aaPredicted RBP10.04□□□□□ -0.8
LINC01108-202ENST00000635227 NCOA1Q15788 1441 aa10.04□□□□□ -0.8
LINC01108-202ENST00000635227 AKNAQ7Z591 1439 aa10.04□□□□□ -0.8
LINC01108-202ENST00000635227 TPP2P29144 1249 aaPredicted RBP10.03□□□□□ -0.8
LINC01108-202ENST00000635227 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
LINC01108-202ENST00000635227 AUHQ13825 339 aaKnown RBP10.03□□□□□ -0.8
LINC01108-202ENST00000635227 FRMPD1Q5SYB0 1578 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 AXDND1Q5T1B0 1012 aaPredicted RBP10.03□□□□□ -0.8
LINC01108-202ENST00000635227 DCAF15Q66K64 600 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 POGZQ7Z3K3 1410 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 NBPF11Q86T75 865 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 CCDC144CPQ8IYA2 1237 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 TANGO6Q9C0B7 1094 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 TRIT1Q9H3H1 467 aaKnown RBP10.03□□□□□ -0.8
LINC01108-202ENST00000635227 GPATCH2Q9NW75 528 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 PRKAG3Q9UGI9 489 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 SLC12A7Q9Y666 1083 aa10.03□□□□□ -0.8
LINC01108-202ENST00000635227 ARHGEF40Q8TER5 1519 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms