RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 TTC14Q96N46 770 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 TXNDC16Q9P2K2 825 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 AGTPBP1Q9UPW5 1226 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 BCS1LQ9Y276 419 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 KDM3AQ9Y4C1 1321 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 H7C1D1 291 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 ACTN4O43707 911 aaKnown RBP13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 RPN1P04843 607 aaKnown RBP13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 SERPINB2P05120 415 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 ARL1P40616 181 aaPredicted RBP13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 ZNF365Q70YC5 407 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 MIER3Q7Z3K6 550 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 PEX26Q7Z412 305 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 MAK16Q9BXY0 300 aaKnown RBP13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 POLR3EQ9NVU0 708 aa13.84□□□□□ -0.19
TNFAIP3-206ENST00000612899 BCRP11274 1271 aa13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 MAP2K2P36507 400 aa13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 ETF1P62495 437 aaKnown RBP13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 HLFQ16534 295 aa13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 SPICE1Q8N0Z3 855 aa13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 FOXP1Q9H334 677 aaPredicted RBP13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 ARMCX3Q9UH62 379 aaPredicted RBP13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 ABCC3O15438 1527 aa13.83□□□□□ -0.19
TNFAIP3-206ENST00000612899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 SEMA3EO15041 775 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 CDC25AP30304 524 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 SUSD4Q5VX71 490 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 GALNT17Q6IS24 598 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 CCDC121Q6ZUS5 278 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 MICALL1Q8N3F8 863 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 UBL4BQ8N7F7 174 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 PIH1D3Q9NQM4 214 aaKnown RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 DDX25Q9UHL0 483 aaKnown RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 USTQ9Y2C2 406 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 ERVV-1B6SEH8 477 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 TRIM37O94972 964 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 ERCC5P28715 1186 aaPredicted RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 CCDC6Q16204 474 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 ERCC6LQ2NKX8 1250 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 FAM26FQ5R3K3 315 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 CCDC51Q96ER9 411 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 LSM14BQ9BX40 385 aaKnown RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 SUDS3Q9H7L9 328 aaPredicted RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 SOS2Q07890 1332 aaPredicted RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 MRRFQ96E11 262 aaKnown RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 HOOK2Q96ED9 719 aa13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.2
TNFAIP3-206ENST00000612899 A0A1B0GUA9 196 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 TNNI1P19237 187 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 PTPN21Q16825 1174 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 LIN9Q5TKA1 542 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 DCUN1D2Q6PH85 259 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 IFT20Q8IY31 132 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 FLAD1Q8NFF5 587 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 MYO1AQ9UBC5 1043 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 THRAP3Q9Y2W1 955 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 SAR1BQ9Y6B6 198 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 SETD1BQ9UPS6 1966 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 FMNL1O95466 1100 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 FERP16591 822 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 ATP2A2P16615 1042 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 IFNAR1P17181 557 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 ABCB4P21439 1286 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 LONP1P36776 959 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 STAT1P42224 750 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 TNFAIP1Q13829 316 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 SMYD4Q8IYR2 804 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 SYNE4Q8N205 404 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 SREK1Q8WXA9 508 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 GLG1Q92896 1179 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 RABEP2Q9H5N1 569 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 PPP2R2CQ9Y2T4 447 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 HECW2Q9P2P5 1572 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 ZNF335Q9H4Z2 1342 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 TSPOAP1O95153 1857 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 ZNF500O60304 480 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 UAP1Q16222 522 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 CFAP221Q4G0U5 840 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 SND1Q7KZF4 910 aaKnown RBP eCLIP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 NUCKS1Q9H1E3 243 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 QTRT2Q9H974 415 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 ASIC3Q9UHC3 531 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 PYCARDQ9ULZ3 195 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 UTP11Q9Y3A2 253 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 CPSF1Q10570 1443 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 USP17L8P0C7I0 530 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 BAG6P46379 1132 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 PTPROQ16827 1216 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 C11orf57Q6ZUT1 292 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 GRAMD1CQ8IYS0 662 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 CNKSR1Q969H4 720 aa13.82□□□□□ -0.2
TNFAIP3-206ENST00000612899 LRRC45Q96CN5 670 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms