RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 AATFQ9NY61 560 aaKnown RBP eCLIP16.22■□□□□ 0.19
VPS36-207ENST00000611132 DENND2AQ9ULE3 1009 aa16.22■□□□□ 0.19
VPS36-207ENST00000611132 KIF28PB7ZC32 967 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 KCNK3O14649 394 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 SCG2P13521 617 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 ZBED6P86452 979 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 FMNL3Q8IVF7 1028 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 ZNF579Q8NAF0 562 aaKnown RBP16.21■□□□□ 0.19
VPS36-207ENST00000611132 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 LMTK2Q8IWU2 1503 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 FLOT1O75955 427 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 HEXIM1O94992 359 aaKnown RBP16.21■□□□□ 0.19
VPS36-207ENST00000611132 NNTQ13423 1086 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 SNCBQ16143 134 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 TUBE1Q9UJT0 475 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 PLEKHG1Q9ULL1 1385 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 TRAPPC10P48553 1259 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 PPP1R7Q15435 360 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 C6orf163Q5TEZ5 329 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 EMBQ6PCB8 327 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 METTL16Q86W50 562 aaKnown RBP16.21■□□□□ 0.19
VPS36-207ENST00000611132 MB21D2Q8IYB1 491 aaPredicted RBP16.21■□□□□ 0.19
VPS36-207ENST00000611132 EPB41L5Q9HCM4 733 aa16.21■□□□□ 0.19
VPS36-207ENST00000611132 PXDNLA1KZ92 1463 aa16.21■□□□□ 0.18
VPS36-207ENST00000611132 GGCXP38435 758 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 CYP27A1Q02318 531 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 SF3A3Q12874 501 aaKnown RBP eCLIP16.2■□□□□ 0.18
VPS36-207ENST00000611132 TCP11X2Q5H9J9 407 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 JPH2Q9BR39 696 aaPredicted RBP16.2■□□□□ 0.18
VPS36-207ENST00000611132 VEZTQ9HBM0 779 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 NKIRAS1Q9NYS0 192 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 PTPRMP28827 1452 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 ZPR1O75312 459 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 RBM5P52756 815 aaKnown RBP eCLIP16.2■□□□□ 0.18
VPS36-207ENST00000611132 INTS8Q75QN2 995 aaKnown RBP16.2■□□□□ 0.18
VPS36-207ENST00000611132 SNX29Q8TEQ0 813 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
VPS36-207ENST00000611132 PLCB1Q9NQ66 1216 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 MYO3AQ8NEV4 1616 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 PCCAP05165 728 aaPredicted RBP16.2■□□□□ 0.18
VPS36-207ENST00000611132 ATP5DP30049 168 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 PHKA1P46020 1223 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 HS2ST1Q7LGA3 356 aa16.2■□□□□ 0.18
VPS36-207ENST00000611132 DHTKD1Q96HY7 919 aaPredicted RBP16.2■□□□□ 0.18
VPS36-207ENST00000611132 NHEJ1Q9H9Q4 299 aaPredicted RBP16.2■□□□□ 0.18
VPS36-207ENST00000611132 FOXN1O15353 648 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 USP14P54578 494 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 TNIP1Q15025 636 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 SYCE1Q8N0S2 351 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 KRT12Q99456 494 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 RIPOR2Q9Y4F9 1068 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 RASSF7Q02833 373 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 NEDD9Q14511 834 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 SEL1L2Q5TEA6 688 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 TAOK1Q7L7X3 1001 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 SRGAP2O75044 1071 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 CXCR5P32302 372 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 CADPS2Q86UW7 1296 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 REXO1L1PQ8IX06 675 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 TC2NQ8N9U0 490 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 RAB17Q9H0T7 212 aa16.19■□□□□ 0.18
VPS36-207ENST00000611132 NEBLO76041 1014 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 CTSWP56202 376 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
VPS36-207ENST00000611132 SDR42E1Q8WUS8 393 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
VPS36-207ENST00000611132 RNF14Q9UBS8 474 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 EHHADHQ08426 723 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 HERC4Q5GLZ8 1057 aaPredicted RBP16.18■□□□□ 0.18
VPS36-207ENST00000611132 COG1Q8WTW3 980 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 ADGRB1O14514 1584 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 KRIT1O00522 736 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 PDE8BO95263 885 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 LSM14BQ9BX40 385 aaKnown RBP16.18■□□□□ 0.18
VPS36-207ENST00000611132 ODF2LQ9ULJ1 636 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
VPS36-207ENST00000611132 CTNNA2P26232 953 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 SLC7A5Q01650 507 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 PDCLQ13371 301 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 INF2Q27J81 1249 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 DENND2CQ68D51 928 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 DNAJC10Q8IXB1 793 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
VPS36-207ENST00000611132 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 USP17L21D6R901 530 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 CTDNEP1O95476 244 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 EPB41P11171 864 aaKnown RBP16.17■□□□□ 0.18
VPS36-207ENST00000611132 NR1D1P20393 614 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 ALDH3A1P30838 453 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 SARNPP82979 210 aaKnown RBP16.17■□□□□ 0.18
VPS36-207ENST00000611132 FAM47AQ5JRC9 791 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 P2RX5Q93086 422 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 ZNF609O15014 1411 aa16.17■□□□□ 0.18
VPS36-207ENST00000611132 ANO9A1A5B4 782 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms