RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 CACNA2D2Q9NY47 1150 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 MAP3K20Q9NYL2 800 aaKnown RBP6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 USP25Q9UHP3 1055 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 RSPH14Q9UHP6 348 aa6.84□□□□□ -1.31
LSM1P2-201ENST00000604911 NISCHQ9Y2I1 1504 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 hCG_2014768A0A024R1R8 64 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 PABPN1LA6NDY0 278 aaKnown RBP6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 NPHP1O15259 732 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 CAND2O75155 1236 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 CDKL5O76039 1030 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 IGHDP01880 384 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 RPL17P18621 184 aaKnown RBP6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 STIP1P31948 543 aaKnown RBP6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 RWDD2BP57060 319 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 PPP2R3AQ06190 1150 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 CCDC15Q0P6D6 951 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 MLECQ14165 292 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 E2F5Q15329 346 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 TAF7Q15545 349 aaPredicted RBP6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 AP1ARQ63HQ0 302 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 FAM214BQ7L5A3 538 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 RBM12BQ8IXT5 1001 aaKnown RBP6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 EFCAB13Q8IY85 973 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 MYOCDQ8IZQ8 938 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 PDCL2Q8N4E4 241 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 LRRN4CLQ8ND94 238 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 PMFBP1Q8TBY8 1022 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 TNPO1Q92973 898 aaKnown RBP6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 ISL2Q96A47 359 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 GBP4Q96PP9 640 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 IRAK4Q9NWZ3 460 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 KIAA1522Q9P206 1035 aaPredicted RBP6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 CHPF2Q9P2E5 772 aa6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 NOL7Q9UMY1 257 aaKnown RBP6.83□□□□□ -1.32
LSM1P2-201ENST00000604911 RNGTTO60942 597 aaKnown RBP6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 TRIM37O94972 964 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 FAM163BP0C2L3 166 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 XRCC5P13010 732 aaKnown RBP6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 MCM5P33992 734 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 FCGRTP55899 365 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 ERVK-24P63145 666 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 HNRNPUQ00839 825 aaKnown RBP eCLIP6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 PPP2R5AQ15172 486 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 AOC3Q16853 763 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 DNAJC21Q5F1R6 531 aaKnown RBP6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 PI16Q6UXB8 463 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 SULF2Q8IWU5 870 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 CCDC146Q8IYE0 955 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 RNF214Q8ND24 703 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 FAM168AQ92567 244 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 MRRFQ96E11 262 aaKnown RBP6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 GPATCH3Q96I76 525 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 HRASLS5Q96KN8 279 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 HEXIM2Q96MH2 286 aaKnown RBP6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 NAP1L4Q99733 375 aaKnown RBP6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 KANK1Q14678 1352 aa6.82□□□□□ -1.32
LSM1P2-201ENST00000604911 TMEM265A0A087WTH1 108 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 BAG4O95429 457 aaKnown RBP6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 MSL3P1P0C860 447 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 U2AF1L5P0DN76 240 aaPredicted RBP6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 XRCC6P12956 609 aaKnown RBP eCLIP6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 ARNTP27540 789 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 ALDH1B1P30837 517 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 ZNF132P52740 706 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 U2AF1Q01081 240 aaKnown RBP eCLIP6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 ZNF252P-AS1Q0IIN9 211 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 PI4K2BQ8TCG2 481 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 HDAC7Q8WUI4 952 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 TMEM40Q8WWA1 233 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 KCNB2Q92953 911 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 CDK5RAP3Q96JB5 506 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 SH3GL3Q99963 347 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 TMOD4Q9NZQ9 345 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 OGFRQ9NZT2 677 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 GABBR1Q9UBS5 961 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 GPN3Q9UHW5 284 aaPredicted RBP6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 ACAD8Q9UKU7 415 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 BLOC1S6Q9UL45 172 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 IKBKGQ9Y6K9 419 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 SBNO2Q9Y2G9 1366 aa6.81□□□□□ -1.32
LSM1P2-201ENST00000604911 TRIM64CA6NLI5 447 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 ATP2B1P20020 1258 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 NTF4P34130 210 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 ZNF124Q15973 351 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 EFCAB2Q5VUJ9 269 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 CCDC30Q5VVM6 783 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 TTLL5Q6EMB2 1281 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 IQCEQ6IPM2 695 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 SND1Q7KZF4 910 aaKnown RBP eCLIP6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 ARHGEF25Q86VW2 580 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 SUGP1Q8IWZ8 645 aaKnown RBP6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 ELOA2Q8IYF1 753 aaPredicted RBP6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 RPUSD2Q8IZ73 545 aaKnown RBP6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 MYO1HQ8N1T3 1032 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 TOP6BLQ8N6T0 577 aa6.8□□□□□ -1.32
LSM1P2-201ENST00000604911 PHC3Q8NDX5 983 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms