RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 TDO2P48775 406 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 C9orf50Q5SZB4 431 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 ZNF697Q5TEC3 545 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 TSHZ3Q63HK5 1081 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 PRPF38AQ8NAV1 312 aaKnown RBP24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 TRIM43Q96BQ3 446 aaPredicted RBP24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 DDX11Q96FC9 970 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 YTHDC1Q96MU7 727 aaKnown RBP24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 FAM161BQ96MY7 647 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 DCTPP1Q9H773 170 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 CLIP2Q9UDT6 1046 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 CTDP1Q9Y5B0 961 aaPredicted RBP24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 TACC3Q9Y6A5 838 aa24.14■■□□□ 1.45
PPFIA3-204ENST00000602492 UNC80Q8N2C7 3258 aa24.13■■□□□ 1.45
PPFIA3-204ENST00000602492 ZBED4O75132 1171 aa24.13■■□□□ 1.45
PPFIA3-204ENST00000602492 ZNF444Q8N0Y2 327 aaPredicted RBP24.13■■□□□ 1.45
PPFIA3-204ENST00000602492 EPB41L4AQ9HCS5 686 aaPredicted RBP24.13■■□□□ 1.45
PPFIA3-204ENST00000602492 SYNGAP1Q96PV0 1343 aa24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 IGKV6D-41A0A0C4DH26 115 aa24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 A0A1W2PQ45 241 aaPredicted RBP24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 A0A1W2PQY0 241 aa24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 APPP05067 770 aa24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 CLTBP09497 229 aa24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 LRRFIP1Q32MZ4 808 aaKnown RBP24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 LENG1Q96BZ8 264 aaPredicted RBP24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 RIPK3Q9Y572 518 aa24.12■■□□□ 1.45
PPFIA3-204ENST00000602492 ATP2A1O14983 1001 aa24.11■■□□□ 1.45
PPFIA3-204ENST00000602492 ADAMTS4O75173 837 aa24.11■■□□□ 1.45
PPFIA3-204ENST00000602492 PRDM1O75626 825 aa24.11■■□□□ 1.45
PPFIA3-204ENST00000602492 SLC4A3P48751 1232 aa24.11■■□□□ 1.45
PPFIA3-204ENST00000602492 CPXCR1Q8N123 301 aa24.11■■□□□ 1.45
PPFIA3-204ENST00000602492 TSEN34Q9BSV6 310 aaKnown RBP24.11■■□□□ 1.45
PPFIA3-204ENST00000602492 M0R2C6 588 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 PQBP1O60828 265 aaKnown RBP24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 MAMDC4Q6UXC1 1216 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 MKL1Q969V6 931 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 KIFC2Q96AC6 838 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 CEP95Q96GE4 821 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 MTMR4Q9NYA4 1195 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 FEM1BQ9UK73 627 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 ZHX1Q9UKY1 873 aaPredicted RBP24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 FAM184BQ9ULE4 1060 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 SYNPO2Q9UMS6 1093 aa24.1■■□□□ 1.45
PPFIA3-204ENST00000602492 DNAJC25-GNG10A0A024R161 153 aa24.09■■□□□ 1.45
PPFIA3-204ENST00000602492 SNAI1O95863 264 aaPredicted RBP24.09■■□□□ 1.45
PPFIA3-204ENST00000602492 ZNF467Q7Z7K2 595 aaPredicted RBP24.09■■□□□ 1.45
PPFIA3-204ENST00000602492 NACAP1Q9BZK3 213 aa24.09■■□□□ 1.45
PPFIA3-204ENST00000602492 SLC38A10Q9HBR0 1119 aa24.09■■□□□ 1.45
PPFIA3-204ENST00000602492 RAVER2Q9HCJ3 691 aaKnown RBP24.09■■□□□ 1.45
PPFIA3-204ENST00000602492 MYH4Q9Y623 1939 aa24.09■■□□□ 1.45
PPFIA3-204ENST00000602492 SYNRGQ9UMZ2 1314 aa24.09■■□□□ 1.45
PPFIA3-204ENST00000602492 PATL2C9JE40 543 aaKnown RBP24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 KIAA0355O15063 1070 aa24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 TTLL1O95922 423 aa24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 SMAD3P84022 425 aaKnown RBP24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 IFNL3Q8IZI9 196 aa24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 NUP133Q8WUM0 1156 aa24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 STARD7Q9NQZ5 370 aa24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 FBXO40Q9UH90 709 aa24.08■■□□□ 1.45
PPFIA3-204ENST00000602492 RAG1P15918 1043 aa24.07■■□□□ 1.44
PPFIA3-204ENST00000602492 ITGB8P26012 769 aa24.07■■□□□ 1.44
PPFIA3-204ENST00000602492 ACLYP53396 1101 aa24.07■■□□□ 1.44
PPFIA3-204ENST00000602492 LRRC47Q8N1G4 583 aaKnown RBP24.07■■□□□ 1.44
PPFIA3-204ENST00000602492 ANKRD35Q8N283 1001 aa24.07■■□□□ 1.44
PPFIA3-204ENST00000602492 GMCL1P1Q8NEA9 526 aa24.07■■□□□ 1.44
PPFIA3-204ENST00000602492 TMEM39AQ9NV64 488 aa24.07■■□□□ 1.44
PPFIA3-204ENST00000602492 PLIN4Q96Q06 1357 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 MOXD2PA6NHM9 499 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 ERC2O15083 957 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 DUSP11O75319 330 aaKnown RBP24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 TSPY3P0CV98 308 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 TSPY8P0CW00 308 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 OAZ1P54368 228 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 PDE4BQ07343 736 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 ANKRD33Q7Z3H0 272 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 KLHDC9Q8NEP7 349 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 CHST13Q8NET6 341 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 TOX2Q96NM4 488 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 CDX2Q99626 313 aaPredicted RBP24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 SEMA6BQ9H3T3 888 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 TTC41PQ6P2S7 1318 aa24.06■■□□□ 1.44
PPFIA3-204ENST00000602492 DCDC2CA8MYV0 355 aa24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 SLC3A2P08195 630 aaKnown RBP24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 BMP3P12645 472 aa24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 ACVR2BQ13705 512 aa24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 SLFN13Q68D06 897 aa24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 NEDD1Q8NHV4 660 aa24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 RNPC3Q96LT9 517 aaKnown RBP24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 ISY1Q9ULR0 285 aaKnown RBP24.05■■□□□ 1.44
PPFIA3-204ENST00000602492 FDX1P10109 184 aa24.04■■□□□ 1.44
PPFIA3-204ENST00000602492 FPGSQ05932 587 aa24.04■■□□□ 1.44
PPFIA3-204ENST00000602492 KCNA10Q16322 511 aa24.04■■□□□ 1.44
PPFIA3-204ENST00000602492 SEC62Q99442 399 aaKnown RBP24.04■■□□□ 1.44
PPFIA3-204ENST00000602492 FSD1Q9BTV5 496 aa24.04■■□□□ 1.44
PPFIA3-204ENST00000602492 NAPBQ9H115 298 aa24.04■■□□□ 1.44
PPFIA3-204ENST00000602492 ABHD16BQ9H3Z7 469 aa24.04■■□□□ 1.44
PPFIA3-204ENST00000602492 SPC25Q9HBM1 224 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms