RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 MBIPQ9NS73 344 aa3.02□□□□□ -1.93
SNORD53-201ENST00000579969 GINM1Q9NU53 330 aa3.02□□□□□ -1.93
SNORD53-201ENST00000579969 BCCIPQ9P287 314 aaKnown RBP eCLIP3.02□□□□□ -1.93
SNORD53-201ENST00000579969 PI4KBQ9UBF8 816 aa3.02□□□□□ -1.93
SNORD53-201ENST00000579969 CTNNA3Q9UI47 895 aa3.02□□□□□ -1.93
SNORD53-201ENST00000579969 HERC5Q9UII4 1024 aaKnown RBP3.02□□□□□ -1.93
SNORD53-201ENST00000579969 MTUS1Q9ULD2 1270 aa3.02□□□□□ -1.93
SNORD53-201ENST00000579969 FAM184BQ9ULE4 1060 aa3.02□□□□□ -1.93
SNORD53-201ENST00000579969 TRIM35Q9UPQ4 493 aa3.02□□□□□ -1.93
SNORD53-201ENST00000579969 A0A0G2JMZ2 1700 aa3.02□□□□□ -1.93
SNORD53-201ENST00000579969 RFX7Q2KHR2 1363 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 PLXNA3P51805 1871 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 SYNRGQ9UMZ2 1314 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 VPS13AQ96RL7 3174 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 UNC79Q9P2D8 2635 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 GPR75-ASB3A0A0A6YYF3 556 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 LCHNA4D1U4 455 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 SPDYE16A6NNV3 312 aaPredicted RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 MBTPS2O43462 519 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 GDF11O95390 407 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 PGK2P07205 417 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 PFKMP08237 780 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 ZNF853P0CG23 659 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 FCER1AP12319 257 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 FGFR2P21802 821 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 CST5P28325 142 aaPredicted RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 LTBRP36941 435 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 BTDP43251 543 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 USP14P54578 494 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 RHBDL3P58872 404 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 ITGA7Q13683 1181 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 PLS1Q14651 629 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 CLUL1Q15846 466 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 ZYXQ15942 572 aaKnown RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 PTPROQ16827 1216 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 TMEM132AQ24JP5 1023 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 SHROOM1Q2M3G4 852 aaPredicted RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 LRRC24Q50LG9 513 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 TCEAL5Q5H9L2 206 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 MCTP2Q6DN12 878 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 KIAA2013Q8IYS2 634 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 ZGPATQ8N5A5 531 aaKnown RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 VGLL2Q8N8G2 317 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 BANK1Q8NDB2 785 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 KCNG4Q8TDN1 519 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 DNAAF4Q8WXU2 420 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 MRPL38Q96DV4 380 aaKnown RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 C12orf42Q96LP6 360 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 RIPOR3Q96MK2 946 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 STK31Q9BXU1 1019 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 FTOQ9C0B1 505 aaKnown RBP eCLIP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 GNL3LQ9NVN8 582 aaKnown RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 CLDND1Q9NY35 253 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 DLL3Q9NYJ7 618 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 DENND2AQ9ULE3 1009 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 CNPY2Q9Y2B0 182 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 DIS3Q9Y2L1 958 aaKnown RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 ZNF292O60281 2723 aa3.01□□□□□ -1.93
SNORD53-201ENST00000579969 SETXQ7Z333 2677 aaKnown RBP3.01□□□□□ -1.93
SNORD53-201ENST00000579969 GRIN2DO15399 1336 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 SALL1Q9NSC2 1324 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 ZNFX1Q9P2E3 1918 aaKnown RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 LINC01553A4QN01 128 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 NCK2O43639 380 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 B4GALT4O60513 344 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 CABYRO75952 493 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 MAP4K4O95819 1239 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 SLC25A27O95847 323 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 SNAI1O95863 264 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 PDGFBP01127 241 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 LDHCP07864 332 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 SUPT20HL2P0C7V6 817 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 RFC2P35250 354 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 KCNJ6P48051 423 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 GJA9P57773 515 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 GNAI1P63096 354 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 PLCB2Q00722 1185 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 BEX3Q00994 111 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 DLX2Q07687 328 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 MKRN4PQ13434 485 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 FKBP5Q13451 457 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 ACVR2BQ13705 512 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 COL9A3Q14050 684 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 COL19A1Q14993 1142 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 PUM3Q15397 648 aaKnown RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 RSPO4Q2I0M5 234 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 ZNF792Q3KQV3 632 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 KIAA0319Q5VV43 1072 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 SPTY2D1Q68D10 685 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 CXCL17Q6UXB2 119 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 TMCO2Q7Z6W1 182 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 METTL16Q86W50 562 aaKnown RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 DZIP1Q86YF9 867 aaKnown RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 CCDC146Q8IYE0 955 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 CRACR2BQ8N4Y2 399 aaPredicted RBP3□□□□□ -1.93
SNORD53-201ENST00000579969 TSPYL6Q8N831 410 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 MB21D1Q8N884 522 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 RETREG2Q8NC44 543 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 FBXO22Q8NEZ5 403 aa3□□□□□ -1.93
SNORD53-201ENST00000579969 ACER1Q8TDN7 264 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms