RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 LRRFIP1Q32MZ4 808 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 PDXDC2PQ6P474 469 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 C16orf86Q6ZW13 317 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 TTC6Q86TZ1 520 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 FAM43AQ8N2R8 423 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 BAP1Q92560 729 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 RNF186Q9NXI6 227 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 ZBTB21Q9ULJ3 1066 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 KCNH4Q9UQ05 1017 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 ZHX2Q9Y6X8 837 aa11.31□□□□□ -0.6
NPLOC4-219ENST00000576713 MINDY4BA8MYZ0 360 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 ZBTB24O43167 697 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 CA12O43570 354 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 APPP05067 770 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 AKR1B1P15121 316 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 TDO2P48775 406 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 PPATQ06203 517 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 GIMAP6Q6P9H5 292 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 SIAH1Q8IUQ4 282 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 TNS4Q8IZW8 715 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-219ENST00000576713 BRCA2P51587 3418 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 CCL15-CCL14A0A0B4J2E2 113 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 TRIM75PA6NK02 468 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 PRDM1O75626 825 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 TRPA1O75762 1119 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 FGAP02671 866 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 GNAT2P19087 354 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 RASA1P20936 1047 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 PTH1RQ03431 593 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 VAC14Q08AM6 782 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 SPP2Q13103 211 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 CCL15Q16663 113 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 CERKLQ49MI3 558 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 BMP2KLQ5H9B9 411 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 GPAT2Q6NUI2 795 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 TICAM2Q86XR7 235 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 PTPRFP10586 1907 aa11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 GREB1LQ9C091 1923 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-219ENST00000576713 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 MANSC4A6NHS7 340 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 POM121CA8CG34 1229 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 BTBD19C9JJ37 291 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 TBC1D8O95759 1140 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 FBXO45P0C2W1 286 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 RPIAP49247 311 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 CAP1Q01518 475 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 PPARAQ07869 468 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 TRIM32Q13049 653 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 SEPT2Q15019 361 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 KIAA1755Q5JYT7 1200 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 TREML2Q5T2D2 321 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 NAPBQ9H115 298 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 SAGE1Q9NXZ1 904 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 GPSM3Q9Y4H4 160 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
NPLOC4-219ENST00000576713 USP17L5A8MUK1 530 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 SGSM2O43147 1006 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 ASNSP08243 561 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 GTF2A2P52657 109 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 HAND2P61296 217 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 PTK2Q05397 1052 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 NR1H3Q13133 447 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 SNAPC2Q13487 334 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 RAB3GAP1Q15042 981 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 ALX1Q15699 326 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 LINC01559Q495D7 138 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 ZNF511Q8NB15 262 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 ZNF280CQ8ND82 737 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 OCSTAMPQ9BR26 566 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 WDR18Q9BV38 432 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 SWAP70Q9UH65 585 aa11.27□□□□□ -0.61
NPLOC4-219ENST00000576713 LAMA4Q16363 1823 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 MPHOSPH10O00566 681 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 CETPP11597 493 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 HMGCS2P54868 508 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 SREBF2Q12772 1141 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 CRHR2Q13324 411 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 COL9A3Q14050 684 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 ZYXQ15942 572 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 FAM47AQ5JRC9 791 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 ANAPC4Q9UJX5 808 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 ZMYM6O95789 1325 aa11.26□□□□□ -0.61
NPLOC4-219ENST00000576713 CASP8AP2Q9UKL3 1982 aa11.25□□□□□ -0.61
NPLOC4-219ENST00000576713 IGKV6D-41A0A0C4DH26 115 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms