RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 SORBS3O60504 671 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 TCF3P15923 654 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 GRIN2CQ14957 1233 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 ARMC9Q7Z3E5 817 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 GTPBP3Q969Y2 492 aaKnown RBP11.18□□□□□ -0.62
CFDP1-206ENST00000566254 ABHD17AQ96GS6 310 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 FRMD6Q96NE9 622 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 MXD3Q9BW11 206 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 MARK1Q9P0L2 795 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 ADAMTS8Q9UP79 889 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 PTPN22Q9Y2R2 807 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 BRCA2P51587 3418 aa11.18□□□□□ -0.62
CFDP1-206ENST00000566254 WNT10BO00744 389 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 SASH1O94885 1247 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 TARSP26639 723 aaKnown RBP11.17□□□□□ -0.62
CFDP1-206ENST00000566254 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 LDLRAD1Q5T700 205 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 TTC39BQ5VTQ0 682 aaPredicted RBP11.17□□□□□ -0.62
CFDP1-206ENST00000566254 KRT25Q7Z3Z0 450 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 CD99L2Q8TCZ2 262 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 ARMC5Q96C12 935 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 ISCA1Q9BUE6 129 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 BABAM1Q9NWV8 329 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 CHPF2Q9P2E5 772 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 ANGEL1Q9UNK9 670 aaKnown RBP11.17□□□□□ -0.62
CFDP1-206ENST00000566254 CENPFP49454 3210 aa11.17□□□□□ -0.62
CFDP1-206ENST00000566254 WTIPA6NIX2 430 aaPredicted RBP11.16□□□□□ -0.62
CFDP1-206ENST00000566254 IGF2BP3O00425 579 aaKnown RBP eCLIP11.16□□□□□ -0.62
CFDP1-206ENST00000566254 LCE2BO14633 110 aa11.16□□□□□ -0.62
CFDP1-206ENST00000566254 EREGO14944 169 aa11.16□□□□□ -0.62
CFDP1-206ENST00000566254 POLR3DP05423 398 aaPredicted RBP11.16□□□□□ -0.62
CFDP1-206ENST00000566254 CAP1Q01518 475 aa11.16□□□□□ -0.62
CFDP1-206ENST00000566254 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.16□□□□□ -0.62
CFDP1-206ENST00000566254 PLBD2Q8NHP8 589 aa11.16□□□□□ -0.62
CFDP1-206ENST00000566254 EPS8L3Q8TE67 593 aaKnown RBP11.16□□□□□ -0.62
CFDP1-206ENST00000566254 ATXN7L1Q9ULK2 861 aaPredicted RBP11.16□□□□□ -0.62
CFDP1-206ENST00000566254 AK5Q9Y6K8 562 aa11.16□□□□□ -0.62
CFDP1-206ENST00000566254 KIAA0100Q14667 2235 aaKnown RBP11.16□□□□□ -0.62
CFDP1-206ENST00000566254 RBBP6Q7Z6E9 1792 aaKnown RBP11.16□□□□□ -0.62
CFDP1-206ENST00000566254 MANSC4A6NHS7 340 aaPredicted RBP11.15□□□□□ -0.62
CFDP1-206ENST00000566254 H0YGN5 161 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 DLL1O00548 723 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 IRS1P35568 1242 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 SPEM2Q0P670 501 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 PI16Q6UXB8 463 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 PODNQ7Z5L7 613 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 GALNT12Q8IXK2 581 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 PMEPA1Q969W9 287 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 ERO1AQ96HE7 468 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 ZFATQ9P243 1243 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 VTI1BQ9UEU0 232 aa11.15□□□□□ -0.62
CFDP1-206ENST00000566254 PSME4Q14997 1843 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 CHL1O00533 1208 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 MMP20O60882 483 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 PPFIA3O75145 1194 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 CYP2E1P05181 493 aaPredicted RBP11.14□□□□□ -0.63
CFDP1-206ENST00000566254 RARAP10276 462 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 CD33P20138 364 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 CES1P23141 567 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 CRHR2Q13324 411 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 DACT2Q5SW24 774 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 Q6ZNB5 142 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 OR13H1Q8NG92 308 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 CLMNQ96JQ2 1002 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 SLC30A3Q99726 388 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
CFDP1-206ENST00000566254 EFCC1Q9HA90 598 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 NPHS2Q9NP85 383 aa11.14□□□□□ -0.63
CFDP1-206ENST00000566254 SZT2Q5T011 3432 aa11.13□□□□□ -0.63
CFDP1-206ENST00000566254 XDHP47989 1333 aa11.13□□□□□ -0.63
CFDP1-206ENST00000566254 INHBEP58166 350 aa11.13□□□□□ -0.63
CFDP1-206ENST00000566254 WNK4Q96J92 1243 aa11.13□□□□□ -0.63
CFDP1-206ENST00000566254 ZNF333Q96JL9 665 aa11.13□□□□□ -0.63
CFDP1-206ENST00000566254 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.13□□□□□ -0.63
CFDP1-206ENST00000566254 TRIOBPQ9H2D6 2365 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 ELL2O00472 640 aaPredicted RBP11.12□□□□□ -0.63
CFDP1-206ENST00000566254 APAF1O14727 1248 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 ZBTB48P10074 688 aaPredicted RBP11.12□□□□□ -0.63
CFDP1-206ENST00000566254 NFKB1P19838 968 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 FGFR3P22607 806 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 SP3Q02447 781 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
CFDP1-206ENST00000566254 SLC4A8Q2Y0W8 1093 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 CCDC152Q4G0S7 254 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 DUSP27Q5VZP5 1158 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 APOBEC3FQ8IUX4 373 aaKnown RBP11.12□□□□□ -0.63
CFDP1-206ENST00000566254 ZBTB38Q8NAP3 1195 aaPredicted RBP11.12□□□□□ -0.63
CFDP1-206ENST00000566254 SLC17A8Q8NDX2 589 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 JARID2Q92833 1246 aaPredicted RBP11.12□□□□□ -0.63
CFDP1-206ENST00000566254 PNMA5Q96PV4 448 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 DBF4Q9UBU7 674 aaPredicted RBP11.12□□□□□ -0.63
CFDP1-206ENST00000566254 PHF24Q9UPV7 400 aa11.12□□□□□ -0.63
CFDP1-206ENST00000566254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.12□□□□□ -0.63
CFDP1-206ENST00000566254 SCAMP3O14828 347 aaKnown RBP11.11□□□□□ -0.63
CFDP1-206ENST00000566254 GIPC1O14908 333 aa11.11□□□□□ -0.63
CFDP1-206ENST00000566254 MAP3K6O95382 1288 aa11.11□□□□□ -0.63
CFDP1-206ENST00000566254 TRIM28Q13263 835 aaKnown RBP11.11□□□□□ -0.63
CFDP1-206ENST00000566254 SLC9C1Q4G0N8 1177 aa11.11□□□□□ -0.63
CFDP1-206ENST00000566254 KIAA0825Q8IV33 1275 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms