RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	SERPINB13	Q9UIV8	391 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	ZNF536	O15090	1300 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	GFRA3	O60609	400 aa		11.53	□□□□□ -0.56
PABPN1-208	ENST00000557702	GJA9	P57773	515 aa		11.53	□□□□□ -0.56
PABPN1-208	ENST00000557702	PUS10	Q3MIT2	529 aa	Known RBP	11.53	□□□□□ -0.56
PABPN1-208	ENST00000557702	GORAB	Q5T7V8	394 aa		11.53	□□□□□ -0.56
PABPN1-208	ENST00000557702	ATG4C	Q96DT6	458 aa		11.53	□□□□□ -0.56
PABPN1-208	ENST00000557702	SLC9A7	Q96T83	725 aa		11.53	□□□□□ -0.56
PABPN1-208	ENST00000557702	PRRX2	Q99811	253 aa		11.53	□□□□□ -0.56
PABPN1-208	ENST00000557702	NOC4L	Q9BVI4	516 aa	Known RBP	11.53	□□□□□ -0.56
PABPN1-208	ENST00000557702		A0A0G2JMZ2	1700 aa		11.52	□□□□□ -0.56
PABPN1-208	ENST00000557702	GRXCR2	A6NFK2	248 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	ARHGEF15	O94989	841 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	SNAI1	O95863	264 aa	Predicted RBP	11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	ACTN1	P12814	892 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	TMEM132B	Q14DG7	1078 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	WDR63	Q8IWG1	891 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	SLC43A3	Q8NBI5	491 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	PRSS33	Q8NF86	280 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	VWCE	Q96DN2	955 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	SCLY	Q96I15	445 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	NEUROD6	Q96NK8	337 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	SEZ6L	Q9BYH1	1024 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	UPF3B	Q9BZI7	483 aa	Known RBP	11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	UPF3A	Q9H1J1	476 aa	Known RBP	11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	EHD4	Q9H223	541 aa		11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	PA2G4	Q9UQ80	394 aa	Known RBP	11.52	□□□□□ -0.57
PABPN1-208	ENST00000557702	SPTBN4	Q9H254	2564 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702		A0A1W2PRG0	241 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	B4GALT4	O60513	344 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	CABYR	O75952	493 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	GUCY1A2	P33402	732 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	ITGA7	Q13683	1181 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	ACVR2B	Q13705	512 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	SEPT2	Q15019	361 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	DEFB128	Q7Z7B8	93 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	TTC6	Q86TZ1	520 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	RIOX2	Q8IUF8	465 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	HERC6	Q8IVU3	1022 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	AGBL1	Q96MI9	1066 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	COPRS	Q9NQ92	184 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	CDK5RAP2	Q96SN8	1893 aa		11.51	□□□□□ -0.57
PABPN1-208	ENST00000557702	ARID4A	P29374	1257 aa	Predicted RBP	11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	COPB2	P35606	906 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	STAT3	P40763	770 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	USP5	P45974	858 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	CCDC144B	Q3MJ40	725 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	CXCL17	Q6UXB2	119 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	MAMDC4	Q6UXC1	1216 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	ERMP1	Q7Z2K6	904 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	GDPD5	Q8WTR4	605 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	TRPV6	Q9H1D0	765 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	FAM50B	Q9Y247	325 aa		11.5	□□□□□ -0.57
PABPN1-208	ENST00000557702	C5orf42	Q9H799	3197 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	MPHOSPH10	O00566	681 aa	Known RBP	11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	ADCY6	O43306	1168 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	MCAM	P43121	646 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	NKX3-2	P78367	333 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	BEX3	Q00994	111 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	TFCP2	Q12800	502 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	DDX10	Q13206	875 aa	Known RBP	11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	PKN1	Q16512	942 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	IER5L	Q5T953	404 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	ADGRA1	Q86SQ6	560 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	DDX11	Q96FC9	970 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	ABHD16B	Q9H3Z7	469 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	PRKAG3	Q9UGI9	489 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	PTPRC	P08575	1304 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	CACNA1B	Q00975	2339 aa		11.49	□□□□□ -0.57
PABPN1-208	ENST00000557702	CACNA1H	O95180	2353 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	CTAGE5	O15320	804 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	ZEB2	O60315	1214 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	UQCRFS1P1	P0C7P4	283 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	UBTFL1	P0CB47	393 aa	Predicted RBP	11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	SHMT1	P34896	483 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	DYNLL1	P63167	89 aa	Known RBP	11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	ZP2	Q05996	745 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	TCF15	Q12870	199 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	KIAA1755	Q5JYT7	1200 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	SPRED2	Q7Z698	418 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	SPICE1	Q8N0Z3	855 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	SUGCT	Q9HAC7	445 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	ADAMTS5	Q9UNA0	930 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	CACNA1G	O43497	2377 aa		11.48	□□□□□ -0.57
PABPN1-208	ENST00000557702	GRIN2D	O15399	1336 aa		11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	SUPT20HL2	P0C7V6	817 aa		11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	RFC2	P35250	354 aa		11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	NOL8	Q76FK4	1167 aa	Known RBP	11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	CERS3	Q8IU89	383 aa		11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	ADHFE1	Q8IWW8	467 aa		11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	NEK9	Q8TD19	979 aa		11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	IRF2BPL	Q9H1B7	796 aa		11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	HDAC5	Q9UQL6	1122 aa		11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	SALL2	Q9Y467	1007 aa	Predicted RBP	11.47	□□□□□ -0.57
PABPN1-208	ENST00000557702	RIF1	Q5UIP0	2472 aa	Known RBP	11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms