RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 FAM227BQ96M60 508 aa10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 ZNF214Q9UL59 606 aaPredicted RBP10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 ZMYND8Q9ULU4 1186 aaPredicted RBP10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 CTDP1Q9Y5B0 961 aaPredicted RBP10.13□□□□□ -0.79
SFSWAP-202ENST00000535202 PGK2P07205 417 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 FXR1P51114 621 aaKnown RBP eCLIP10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 NMIQ13287 307 aaPredicted RBP10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 MCMDC2Q4G0Z9 681 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 PRAMEF19Q5SWL8 479 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 ANO1Q5XXA6 986 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 SNRNP48Q6IEG0 339 aaKnown RBP10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 CHD1LQ86WJ1 897 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 CPXCR1Q8N123 301 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 PRPF38AQ8NAV1 312 aaKnown RBP10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 GMCL1P1Q8NEA9 526 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 MKL1Q969V6 931 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 MAML3Q96JK9 1138 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 TEX13BQ9BXU2 312 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 INCENPQ9NQS7 918 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 TOMM22Q9NS69 142 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 FEM1BQ9UK73 627 aa10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.12□□□□□ -0.79
SFSWAP-202ENST00000535202 RANBP6O60518 1105 aaKnown RBP10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 NMT2O60551 498 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 ZBED4O75132 1171 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 IGHA2P01877 340 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 MYCNP04198 464 aaPredicted RBP10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 COL6A1P12109 1028 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 BMP3P12645 472 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 SYN1P17600 705 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 NUCB1Q02818 461 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 IKQ13123 557 aaPredicted RBP10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 RRP12Q5JTH9 1297 aaKnown RBP10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 ZNF589Q86UQ0 364 aaPredicted RBP10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 RAVER2Q9HCJ3 691 aaKnown RBP10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 ANAPC4Q9UJX5 808 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 SYNPO2Q9UMS6 1093 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 STX8Q9UNK0 236 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 MTMR7Q9Y216 660 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 TACC3Q9Y6A5 838 aa10.11□□□□□ -0.79
SFSWAP-202ENST00000535202 CCDC171Q6TFL3 1326 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 TMEM232C9JQI7 657 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 DNM1LO00429 736 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 SEPT4O43236 478 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 FGAP02671 866 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 HSPD1P10809 573 aaKnown RBP10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 SDSP20132 328 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 MCCP23508 829 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 SLC1A4P43007 532 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 HAND2P61296 217 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 ALX1Q15699 326 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 LRRC26Q2I0M4 334 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 ZNF792Q3KQV3 632 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 PPP4R3BQ5MIZ7 849 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 GJC2Q5T442 439 aaPredicted RBP10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 PLEKHM2Q8IWE5 1019 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 SENP6Q9GZR1 1112 aaPredicted RBP10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 PRO3102Q9H379 93 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 SLC38A10Q9HBR0 1119 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 RIPK3Q9Y572 518 aa10.1□□□□□ -0.79
SFSWAP-202ENST00000535202 KBTBD13C9JR72 458 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 ATP2A1O14983 1001 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 ORC4O43929 436 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 STAT2P52630 851 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 ATN1P54259 1190 aaPredicted RBP10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 KCTD1Q719H9 257 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 RASGRP2Q7LDG7 609 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 FAM160B2Q86V87 743 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 TICAM2Q86XR7 235 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 GMCL1Q96IK5 515 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 TINF2Q9BSI4 451 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 OSBPL3Q9H4L5 887 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 IL17RBQ9NRM6 502 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 HOMER2Q9NSB8 354 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 DIAPH3Q9NSV4 1193 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 PCDH10Q9P2E7 1040 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 DIS3Q9Y2L1 958 aaKnown RBP10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 SMCHD1A6NHR9 2005 aa10.09□□□□□ -0.79
SFSWAP-202ENST00000535202 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 CEP290O15078 2479 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 LAMA4Q16363 1823 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 FGRP09769 529 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 TAL1P17542 331 aaPredicted RBP10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 OAZ1P54368 228 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 MFAP1P55081 439 aaKnown RBP10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 IRX6P78412 446 aaPredicted RBP10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 GSE1Q14687 1217 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 CCDC96Q2M329 555 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 CCDC174Q6PII3 467 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 CWC27Q6UX04 472 aaKnown RBP10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 ANKRD35Q8N283 1001 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 ARRDC4Q8NCT1 418 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 CHST13Q8NET6 341 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 CHURC1Q8WUH1 139 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 STAG1Q8WVM7 1258 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 NRBP1Q9UHY1 535 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 MCM3APO60318 1980 aa10.08□□□□□ -0.8
SFSWAP-202ENST00000535202 FDX1P10109 184 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms