RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 KLRC3Q07444 240 aa12.79□□□□□ -0.36
VPS26B-203ENST00000525918 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS26B-203ENST00000525918 PRPF38AQ8NAV1 312 aaKnown RBP12.79□□□□□ -0.36
VPS26B-203ENST00000525918 TSEN34Q9BSV6 310 aaKnown RBP12.79□□□□□ -0.36
VPS26B-203ENST00000525918 TEX13BQ9BXU2 312 aa12.79□□□□□ -0.36
VPS26B-203ENST00000525918 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
VPS26B-203ENST00000525918 MCM3APO60318 1980 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 A0A1W2PQ45 241 aaPredicted RBP12.78□□□□□ -0.36
VPS26B-203ENST00000525918 A0A1W2PQY0 241 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 MINDY4BA8MYZ0 360 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 ATP2A1O14983 1001 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
VPS26B-203ENST00000525918 RAG1P15918 1043 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 SNRNP48Q6IEG0 339 aaKnown RBP12.78□□□□□ -0.36
VPS26B-203ENST00000525918 MAMDC4Q6UXC1 1216 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 KBTBD3Q8NAB2 608 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
VPS26B-203ENST00000525918 SEMA6BQ9H3T3 888 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 ZNF287Q9HBT7 754 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 RCAN3Q9UKA8 241 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 SYNGAP1Q96PV0 1343 aa12.78□□□□□ -0.36
VPS26B-203ENST00000525918 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 KIAA0355O15063 1070 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 ZBED4O75132 1171 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 ADAMTS4O75173 837 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 ITGB8P26012 769 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
VPS26B-203ENST00000525918 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 NUP133Q8WUM0 1156 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 APPBP2Q92624 585 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 OSBP2Q969R2 916 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 MKL1Q969V6 931 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 GPATCH3Q96I76 525 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 TOX2Q96NM4 488 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 CDX2Q99626 313 aaPredicted RBP12.77□□□□□ -0.37
VPS26B-203ENST00000525918 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.37
VPS26B-203ENST00000525918 CLIP2Q9UDT6 1046 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 FAM184BQ9ULE4 1060 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 CTDP1Q9Y5B0 961 aaPredicted RBP12.77□□□□□ -0.37
VPS26B-203ENST00000525918 EYSQ5T1H1 3165 aa12.77□□□□□ -0.37
VPS26B-203ENST00000525918 CUL9Q8IWT3 2517 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 MOXD2PA6NHM9 499 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
VPS26B-203ENST00000525918 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
VPS26B-203ENST00000525918 SNAI1O95863 264 aaPredicted RBP12.76□□□□□ -0.37
VPS26B-203ENST00000525918 NDUFB10O96000 172 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 ZFYP08048 801 aaPredicted RBP12.76□□□□□ -0.37
VPS26B-203ENST00000525918 GNAT2P19087 354 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 ACLYP53396 1101 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 ANKRD33Q7Z3H0 272 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 ZNF467Q7Z7K2 595 aaPredicted RBP12.76□□□□□ -0.37
VPS26B-203ENST00000525918 CPXCR1Q8N123 301 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 KLHDC9Q8NEP7 349 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 LENG1Q96BZ8 264 aaPredicted RBP12.76□□□□□ -0.37
VPS26B-203ENST00000525918 STARD7Q9NQZ5 370 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 SYNPO2Q9UMS6 1093 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 SYNRGQ9UMZ2 1314 aa12.76□□□□□ -0.37
VPS26B-203ENST00000525918 CDH23Q9H251 3354 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 IGKV6D-41A0A0C4DH26 115 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 GPAA1O43292 621 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 DUSP11O75319 330 aaKnown RBP12.75□□□□□ -0.37
VPS26B-203ENST00000525918 APPP05067 770 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 TDO2P48775 406 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 FPGSQ05932 587 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 FAAP100Q0VG06 881 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 KCNA10Q16322 511 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 LRRFIP1Q32MZ4 808 aaKnown RBP12.75□□□□□ -0.37
VPS26B-203ENST00000525918 C20orf194Q5TEA3 1177 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 CCSAPQ6IQ19 270 aaPredicted RBP12.75□□□□□ -0.37
VPS26B-203ENST00000525918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS26B-203ENST00000525918 ANKRD35Q8N283 1001 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 KIFC2Q96AC6 838 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 RNPC3Q96LT9 517 aaKnown RBP12.75□□□□□ -0.37
VPS26B-203ENST00000525918 TTYH1Q9H313 450 aaPredicted RBP12.75□□□□□ -0.37
VPS26B-203ENST00000525918 DCTPP1Q9H773 170 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 SLC38A10Q9HBR0 1119 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 MTMR4Q9NYA4 1195 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 FBXO40Q9UH90 709 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
VPS26B-203ENST00000525918 ZHX1Q9UKY1 873 aaPredicted RBP12.75□□□□□ -0.37
VPS26B-203ENST00000525918 MROH7Q68CQ1 1323 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 TMEM265A0A087WTH1 108 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 PATL2C9JE40 543 aaKnown RBP12.74□□□□□ -0.37
VPS26B-203ENST00000525918 TTLL1O95922 423 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 FDX1P10109 184 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 OAZ1P54368 228 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 EPHB4P54760 987 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 ACVR2BQ13705 512 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
VPS26B-203ENST00000525918 CHST13Q8NET6 341 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 MAFAQ8NHW3 353 aaPredicted RBP12.74□□□□□ -0.37
VPS26B-203ENST00000525918 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 GLT1D1Q96MS3 346 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 ABHD16BQ9H3Z7 469 aa12.74□□□□□ -0.37
VPS26B-203ENST00000525918 SPC25Q9HBM1 224 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms