RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 STAT3P40763 770 aa11.22□□□□□ -0.61
SF3B2-204ENST00000525207 FAM47AQ5JRC9 791 aa11.22□□□□□ -0.61
SF3B2-204ENST00000525207 ZNF589Q86UQ0 364 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-204ENST00000525207 MMP19Q99542 508 aa11.22□□□□□ -0.61
SF3B2-204ENST00000525207 RWDD1Q9H446 243 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-204ENST00000525207 ANAPC4Q9UJX5 808 aa11.22□□□□□ -0.61
SF3B2-204ENST00000525207 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 CCDC171Q6TFL3 1326 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 TSPY2A6NKD2 308 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 DNM1LO00429 736 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 IGHDP01880 384 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 CNGA1P29973 690 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 TFAP4Q01664 338 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 NUCB1Q02818 461 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 NMIQ13287 307 aaPredicted RBP11.21□□□□□ -0.61
SF3B2-204ENST00000525207 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
SF3B2-204ENST00000525207 KCTD2Q14681 263 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 ALX1Q15699 326 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 PPP4R3BQ5MIZ7 849 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
SF3B2-204ENST00000525207 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
SF3B2-204ENST00000525207 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 PRPF38AQ8NAV1 312 aaKnown RBP11.21□□□□□ -0.61
SF3B2-204ENST00000525207 OSBPL3Q9H4L5 887 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 SLC38A10Q9HBR0 1119 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 FEM1BQ9UK73 627 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 TACC3Q9Y6A5 838 aa11.21□□□□□ -0.61
SF3B2-204ENST00000525207 LAMA3Q16787 3333 aa11.21□□□□□ -0.62
SF3B2-204ENST00000525207 A0A1W2PPC1 479 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 SEPT4O43236 478 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 ORC4O43929 436 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 PGK2P07205 417 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 FGRP09769 529 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 BMP3P12645 472 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 STAT2P52630 851 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 LRRC26Q2I0M4 334 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 ZNF792Q3KQV3 632 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 SLFN13Q68D06 897 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 RASGRP2Q7LDG7 609 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 KIFC2Q96AC6 838 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 GMCL1Q96IK5 515 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 NRBP1Q9UHY1 535 aa11.2□□□□□ -0.62
SF3B2-204ENST00000525207 ZMYND8Q9ULU4 1186 aaPredicted RBP11.2□□□□□ -0.62
SF3B2-204ENST00000525207 DIS3Q9Y2L1 958 aaKnown RBP11.2□□□□□ -0.62
SF3B2-204ENST00000525207 NMT2O60551 498 aa11.19□□□□□ -0.62
SF3B2-204ENST00000525207 HSPD1P10809 573 aaKnown RBP11.19□□□□□ -0.62
SF3B2-204ENST00000525207 NOVP48745 357 aa11.19□□□□□ -0.62
SF3B2-204ENST00000525207 OAZ1P54368 228 aa11.19□□□□□ -0.62
SF3B2-204ENST00000525207 RILPL2Q969X0 211 aa11.19□□□□□ -0.62
SF3B2-204ENST00000525207 RAVER2Q9HCJ3 691 aaKnown RBP11.19□□□□□ -0.62
SF3B2-204ENST00000525207 IL17RBQ9NRM6 502 aa11.19□□□□□ -0.62
SF3B2-204ENST00000525207 STX8Q9UNK0 236 aa11.19□□□□□ -0.62
SF3B2-204ENST00000525207 RIPK3Q9Y572 518 aa11.19□□□□□ -0.62
SF3B2-204ENST00000525207 SYNGAP1Q96PV0 1343 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 DNAJC25-GNG10A0A024R161 153 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 ZBED4O75132 1171 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 FGAP02671 866 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 FDX1P10109 184 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 SYN1P17600 705 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 SDSP20132 328 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 SLC1A4P43007 532 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 ANO1Q5XXA6 986 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 CPXCR1Q8N123 301 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
SF3B2-204ENST00000525207 GDF15Q99988 308 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 TINF2Q9BSI4 451 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 INCENPQ9NQS7 918 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
SF3B2-204ENST00000525207 ISY1Q9ULR0 285 aaKnown RBP11.18□□□□□ -0.62
SF3B2-204ENST00000525207 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
SF3B2-204ENST00000525207 ZNF536O15090 1300 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 TMEM232C9JQI7 657 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 KBTBD13C9JR72 458 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 RANBP6O60518 1105 aaKnown RBP11.17□□□□□ -0.62
SF3B2-204ENST00000525207 PLA2G6O60733 806 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 MAGEA10P43363 369 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-204ENST00000525207 MFAP1P55081 439 aaKnown RBP11.17□□□□□ -0.62
SF3B2-204ENST00000525207 PRAMEF19Q5SWL8 479 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 GJC2Q5T442 439 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-204ENST00000525207 TBC1D10CQ8IV04 446 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 CHST13Q8NET6 341 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 FGD4Q96M96 766 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 SENP6Q9GZR1 1112 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-204ENST00000525207 TOMM22Q9NS69 142 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 FBXO40Q9UH90 709 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 SZT2Q5T011 3432 aa11.17□□□□□ -0.62
SF3B2-204ENST00000525207 NEDD4P46934 1319 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-204ENST00000525207 RARBP10826 455 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 PCP11498 1178 aaKnown RBP11.16□□□□□ -0.62
SF3B2-204ENST00000525207 AKR1A1P14550 325 aa11.16□□□□□ -0.62
SF3B2-204ENST00000525207 TAL1P17542 331 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-204ENST00000525207 MCCP23508 829 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms