RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 CTDSPL2Q05D32 466 aa12.91□□□□□ -0.34
PVT1-216ENST00000523068 VPS53Q5VIR6 699 aa12.91□□□□□ -0.34
PVT1-216ENST00000523068 SLFN13Q68D06 897 aa12.91□□□□□ -0.34
PVT1-216ENST00000523068 PLEKHM2Q8IWE5 1019 aa12.91□□□□□ -0.34
PVT1-216ENST00000523068 LRRC47Q8N1G4 583 aaKnown RBP12.91□□□□□ -0.34
PVT1-216ENST00000523068 MAML3Q96JK9 1138 aa12.91□□□□□ -0.34
PVT1-216ENST00000523068 FAM227BQ96M60 508 aa12.91□□□□□ -0.34
PVT1-216ENST00000523068 STX8Q9UNK0 236 aa12.91□□□□□ -0.34
PVT1-216ENST00000523068 COLQQ9Y215 455 aaPredicted RBP12.91□□□□□ -0.34
PVT1-216ENST00000523068 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
PVT1-216ENST00000523068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
PVT1-216ENST00000523068 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 LAMA4Q16363 1823 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 HIP1O00291 1037 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 ATP2A1O14983 1001 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 RANBP6O60518 1105 aaKnown RBP12.9□□□□□ -0.34
PVT1-216ENST00000523068 FGAP02671 866 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 HSPD1P10809 573 aaKnown RBP12.9□□□□□ -0.34
PVT1-216ENST00000523068 CYBAP13498 195 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 OAZ1P54368 228 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 NMIQ13287 307 aaPredicted RBP12.9□□□□□ -0.34
PVT1-216ENST00000523068 SNRNP48Q6IEG0 339 aaKnown RBP12.9□□□□□ -0.34
PVT1-216ENST00000523068 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 GMCL1Q96IK5 515 aa12.9□□□□□ -0.34
PVT1-216ENST00000523068 SEPT4O43236 478 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 ORC4O43929 436 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 FGRP09769 529 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 SDSP20132 328 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 SLC1A4P43007 532 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 STAT2P52630 851 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 FAM160B2Q86V87 743 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 CHURC1Q8WUH1 139 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 SLC38A10Q9HBR0 1119 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 TOMM22Q9NS69 142 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 NRBP1Q9UHY1 535 aa12.89□□□□□ -0.35
PVT1-216ENST00000523068 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
PVT1-216ENST00000523068 CEP290O15078 2479 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 SMCHD1A6NHR9 2005 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 DNM1LO00429 736 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
PVT1-216ENST00000523068 COL6A1P12109 1028 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 IKQ13123 557 aaPredicted RBP12.88□□□□□ -0.35
PVT1-216ENST00000523068 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
PVT1-216ENST00000523068 C7orf61Q8IZ16 206 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 MSL3Q8N5Y2 521 aaKnown RBP12.88□□□□□ -0.35
PVT1-216ENST00000523068 ARRDC4Q8NCT1 418 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 TRPV1Q8NER1 839 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 TINF2Q9BSI4 451 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 IL17RBQ9NRM6 502 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 DIAPH3Q9NSV4 1193 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 PFASO15067 1338 aa12.88□□□□□ -0.35
PVT1-216ENST00000523068 PLA2G6O60733 806 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 PGK2P07205 417 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 NT5C2P49902 561 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 ZNF792Q3KQV3 632 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
PVT1-216ENST00000523068 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.87□□□□□ -0.35
PVT1-216ENST00000523068 CHST13Q8NET6 341 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 RNF41Q9H4P4 317 aaPredicted RBP12.87□□□□□ -0.35
PVT1-216ENST00000523068 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
PVT1-216ENST00000523068 INCENPQ9NQS7 918 aa12.87□□□□□ -0.35
PVT1-216ENST00000523068 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 KBTBD13C9JR72 458 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 MCCP23508 829 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 NOVP48745 357 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 CWC27Q6UX04 472 aaKnown RBP12.86□□□□□ -0.35
PVT1-216ENST00000523068 ANKRD35Q8N283 1001 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 DCAF4Q8WV16 495 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
PVT1-216ENST00000523068 TCP11L1Q9NUJ3 509 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
PVT1-216ENST00000523068 CNPY2Q9Y2B0 182 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 RIPK3Q9Y572 518 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 SYNGAP1Q96PV0 1343 aa12.86□□□□□ -0.35
PVT1-216ENST00000523068 MCM3APO60318 1980 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 ZNF213O14771 459 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 NMT2O60551 498 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 RARBP10826 455 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
PVT1-216ENST00000523068 HAND2P61296 217 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 TKFCQ3LXA3 575 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 PRAMEF19Q5SWL8 479 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 KCTD1Q719H9 257 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
PVT1-216ENST00000523068 TTC14Q96N46 770 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
PVT1-216ENST00000523068 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
PVT1-216ENST00000523068 FXR1P51114 621 aaKnown RBP eCLIP12.84□□□□□ -0.35
PVT1-216ENST00000523068 LRRC26Q2I0M4 334 aa12.84□□□□□ -0.35
PVT1-216ENST00000523068 CCDC96Q2M329 555 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms