RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 CNKSR2Q8WXI2 1034 aa12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 HPS5Q9UPZ3 1129 aa12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 SAMM50Q9Y512 469 aa12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 FRMPD2Q68DX3 1309 aaPredicted RBP12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 LMAN1P49257 510 aa12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 SLC1A4P43007 532 aa12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 TBC1D9BQ66K14 1250 aa12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 LRRC47Q8N1G4 583 aaKnown RBP12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 USP40Q9NVE5 1235 aa12.61□□□□□ -0.39
PCDHGB4-201ENST00000519479 PNPLA7Q6ZV29 1317 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 NMT2O60551 498 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 GALNT17Q6IS24 598 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 NEK8Q86SG6 692 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 VSTM4Q8IW00 320 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 PCDHA4Q9UN74 947 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 STXBP4Q6ZWJ1 553 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 CCDC65Q8IXS2 484 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 MTA3Q9BTC8 594 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 EPB41L4AQ9HCS5 686 aaPredicted RBP12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 TRAF1Q13077 416 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 ARHGEF1Q92888 912 aaKnown RBP12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 FAM84BQ96KN1 310 aaPredicted RBP12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 NFAT5O94916 1531 aa12.6□□□□□ -0.39
PCDHGB4-201ENST00000519479 PIK3C2AO00443 1686 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 TUBB4BP68371 445 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 GPIHBP1Q8IV16 184 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 CCDC51Q96ER9 411 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 DCP1AQ9NPI6 582 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 H7C1D1 291 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 CTR9Q6PD62 1173 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 PAGE5Q96GU1 130 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 FUCA2Q9BTY2 467 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 SCNN1DP51172 638 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 TMEM132AQ24JP5 1023 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 OR8K1Q8NGG5 319 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 BPIFA3Q9BQP9 254 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 PHLPP1O60346 1717 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 NPR1P16066 1061 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 CASP14P31944 242 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 COL9A3Q14050 684 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 NAP1L4Q99733 375 aaKnown RBP12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 NUP58Q9BVL2 599 aa12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 VIRMAQ69YN4 1812 aaKnown RBP12.59□□□□□ -0.39
PCDHGB4-201ENST00000519479 RGL2O15211 777 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 FOXN1O15353 648 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 CASP1P29466 404 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 USP8P40818 1118 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 RCAN1P53805 252 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 RAD51AP2Q09MP3 1159 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 FCHSD1Q86WN1 690 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 VEZTQ9HBM0 779 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 CETN1Q12798 172 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 MMP10P09238 476 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 HERC4Q5GLZ8 1057 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 LARGE2Q8N3Y3 721 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 ENGASEQ8NFI3 743 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 TBC1D7Q9P0N9 293 aa12.58□□□□□ -0.4
PCDHGB4-201ENST00000519479 COPB1P53618 953 aaKnown RBP12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 DOK7Q18PE1 504 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 JAKMIP2Q96AA8 810 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 USP27XA6NNY8 438 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 GRAPQ13588 217 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 TEKT1Q969V4 418 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 OSBPL5Q9H0X9 879 aaPredicted RBP12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 FAM207AQ9NSI2 230 aaPredicted RBP12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 TMEM232C9JQI7 657 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 PHACTR2O75167 634 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 RBL2Q08999 1139 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 ITPK1Q13572 414 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 TUBB2AQ13885 445 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 SH3RF3Q8TEJ3 882 aaPredicted RBP12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 TUBB2BQ9BVA1 445 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 AGXT2Q9BYV1 514 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 GLT8D2Q9H1C3 349 aa12.57□□□□□ -0.4
PCDHGB4-201ENST00000519479 FAM13AO94988 1023 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 PRPF4BQ13523 1007 aaKnown RBP12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.56□□□□□ -0.4
PCDHGB4-201ENST00000519479 PPEF1O14829 653 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms