RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 HTR3BO95264 441 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 FXR1P51114 621 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 MAP2K1Q02750 393 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 GSTM4Q03013 218 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 POU4F3Q15319 338 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 BBS9Q3SYG4 887 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 GDF6Q6KF10 455 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 PSAPL1Q6NUJ1 521 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 TTC6Q86TZ1 520 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 FAM178BQ8IXR5 827 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 LRRC47Q8N1G4 583 aaKnown RBP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 GOLGA6L1Q8N7Z2 621 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 KLHL23Q8NBE8 558 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 ELMO3Q96BJ8 720 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 ADAM30Q9UKF2 790 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 CASP8AP2Q9UKL3 1982 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 H3BM21 787 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 AGRPO00253 132 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 SOX1O00570 391 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 PPFIA3O75145 1194 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 GJB6O95452 261 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 SLFN14P0C7P3 912 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 CCNFP41002 786 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 RASIP1Q5U651 963 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 ADAMTSL4Q6UY14 1074 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 VWA5B2Q8N398 1253 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 LILRB2Q8N423 598 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 STK35Q8TDR2 534 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 GPATCH3Q96I76 525 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 PCDH12Q9NPG4 1184 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 SH2B1Q9NRF2 756 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 MBIPQ9NS73 344 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 POLR3KQ9Y2Y1 108 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 SYNGAP1Q96PV0 1343 aa6.4□□□□□ -1.39
HMGB1P23-201ENST00000518743 PHRF1Q9P1Y6 1649 aaKnown RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 PIK3C2AO00443 1686 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 VIRMAQ69YN4 1812 aaKnown RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 A0A1W2PQH9 124 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 GFRA2O00451 464 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 EPHA1P21709 976 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 GMPRP36959 345 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 ZNF143P52747 638 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 SSRP1Q08945 709 aaKnown RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 TMEM201Q5SNT2 666 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 HGSNATQ68CP4 663 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 DHRS1Q96LJ7 313 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 TNKS2Q9H2K2 1166 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 TYW1Q9NV66 732 aaKnown RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 RNF181Q9P0P0 153 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 NAGPAQ9UK23 515 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 BRD4O60885 1362 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 CEP162Q5TB80 1403 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 TRIOBPQ9H2D6 2365 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 ESYT3A0FGR9 886 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 GPR25O00155 361 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 RAB11FIP3O75154 756 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 VEGFAP15692 232 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 PLCG1P19174 1290 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 GYS2P54840 703 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 PDE3AQ14432 1141 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 TMEM67Q5HYA8 995 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 NLRC3Q7RTR2 1065 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 MARCH10Q8NA82 808 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 GPBAR1Q8TDU6 330 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 SLC7A3Q8WY07 619 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 SGSM3Q96HU1 749 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 MDFIQ99750 246 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 GPRASP1Q5JY77 1395 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 NRXN1Q9ULB1 1477 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 BTAF1O14981 1849 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 CRYBG1Q9Y4K1 1723 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 ALS2Q96Q42 1657 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 EEA1Q15075 1411 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 C2CD2LO14523 706 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 TNFRSF10CO14798 259 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 LILRB5O75023 590 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 NME1P15531 152 aaKnown RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 YARSP54577 528 aaKnown RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 SUZ12Q15022 739 aaKnown RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 KIF4BQ2VIQ3 1234 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 VHLLQ6RSH7 139 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 C6orf15Q6UXA7 325 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 SLCO4C1Q6ZQN7 724 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 WFDC8Q8IUA0 241 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 NPAS3Q8IXF0 933 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 MICAL1Q8TDZ2 1067 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 IRF7Q92985 503 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 PLPPR2Q96GM1 343 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 IPO9Q96P70 1041 aaKnown RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 JPH1Q9HDC5 661 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 LRRC4BQ9NT99 713 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 REV1Q9UBZ9 1251 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 ZMYM5Q9UJ78 669 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 IFT172Q9UG01 1749 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms