RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 CLTBP09497 229 aa16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 KLRC3Q07444 240 aa16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 TSHZ3Q63HK5 1081 aa16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 SNRNP48Q6IEG0 339 aaKnown RBP16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 STK11IPQ8N1F8 1099 aa16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 MSL3Q8N5Y2 521 aaKnown RBP16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 LAMA2P24043 3122 aaKnown RBP16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 SYNGAP1Q96PV0 1343 aa16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 SYNRGQ9UMZ2 1314 aa16.92■□□□□ 0.3
POLR2J3-207ENST00000503564 PLIN4Q96Q06 1357 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 MINDY4BA8MYZ0 360 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 M0R2C6 588 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 ATP2A1O14983 1001 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 KIAA0355O15063 1070 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 GPAA1O43292 621 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 SNAI1O95863 264 aaPredicted RBP16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 MAMDC4Q6UXC1 1216 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
POLR2J3-207ENST00000503564 A0A0C4DFX4 3053 aa16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 LRRC37A2A6NM11 1700 aa16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 EPHB4P54760 987 aa16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 SMAD3P84022 425 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 PRPF38AQ8NAV1 312 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 CEP95Q96GE4 821 aa16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 FGD4Q96M96 766 aa16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 CDX2Q99626 313 aaPredicted RBP16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 TSEN34Q9BSV6 310 aaKnown RBP16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
POLR2J3-207ENST00000503564 PQBP1O60828 265 aaKnown RBP16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 CCSAPQ6IQ19 270 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 ANKRD33Q7Z3H0 272 aa16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 MKL1Q969V6 931 aa16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 COL25A1Q9BXS0 654 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 TTYH1Q9H313 450 aaPredicted RBP16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 SLC38A10Q9HBR0 1119 aa16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 SYNPO2Q9UMS6 1093 aa16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 UNC80Q8N2C7 3258 aa16.89■□□□□ 0.29
POLR2J3-207ENST00000503564 MYADML2A6NDP7 307 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 ADCY6O43306 1168 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 PRDM1O75626 825 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 ZFYP08048 801 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 GNAT2P19087 354 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 CST5P28325 142 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 TDO2P48775 406 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 ACLYP53396 1101 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 CPXCR1Q8N123 301 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 GPATCH3Q96I76 525 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 TOX2Q96NM4 488 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
POLR2J3-207ENST00000503564 MOXD2PA6NHM9 499 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 DUSP11O75319 330 aaKnown RBP16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 RAG1P15918 1043 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 FAAP100Q0VG06 881 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 GMCL1P1Q8NEA9 526 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 KIFC2Q96AC6 838 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 DDX11Q96FC9 970 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 RNPC3Q96LT9 517 aaKnown RBP16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 RAVER2Q9HCJ3 691 aaKnown RBP16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 STARD7Q9NQZ5 370 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 FAM184BQ9ULE4 1060 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 LCTP09848 1927 aa16.87■□□□□ 0.29
POLR2J3-207ENST00000503564 ZBED4O75132 1171 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 TTLL1O95922 423 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 OAZ1P54368 228 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 IRX5P78411 483 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 KCNA10Q16322 511 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 IFNL3Q8IZI9 196 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 NUP133Q8WUM0 1156 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 KATNBL1Q9H079 304 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 UPF3AQ9H1J1 476 aaKnown RBP16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 TMEM39AQ9NV64 488 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 TBX21Q9UL17 535 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 CDH23Q9H251 3354 aa16.86■□□□□ 0.29
POLR2J3-207ENST00000503564 PATL2C9JE40 543 aaKnown RBP16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 FPGSQ05932 587 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 ACVR2BQ13705 512 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 ARMCX2Q7L311 632 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 CHST13Q8NET6 341 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 NEDD1Q8NHV4 660 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 MYLIPQ8WY64 445 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 SEC62Q99442 399 aaKnown RBP16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 ABHD16BQ9H3Z7 469 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 FBXO40Q9UH90 709 aa16.85■□□□□ 0.29
POLR2J3-207ENST00000503564 TMEM265A0A087WTH1 108 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms