RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 NEK1Q96PY6 1258 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 MAP3K14Q99558 947 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 PSMA5P28066 241 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 LIFRP42702 1097 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 IKQ13123 557 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-212ENST00000489728 TMEM132BQ14DG7 1078 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 Q3C1V9 767 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 KCTD1Q719H9 257 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.33
CPSF7-212ENST00000489728 GPR142Q7Z601 462 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 PLEKHH3Q7Z736 793 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 KIFC2Q96AC6 838 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
CPSF7-212ENST00000489728 USP26Q9BXU7 913 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 PORCNQ9H237 461 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 CTDP1Q9Y5B0 961 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-212ENST00000489728 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
CPSF7-212ENST00000489728 SLC15A5A6NIM6 579 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 SH2B2O14492 632 aaPredicted RBP12.95□□□□□ -0.34
CPSF7-212ENST00000489728 DDAH1O94760 285 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 XRCC5P13010 732 aaKnown RBP12.95□□□□□ -0.34
CPSF7-212ENST00000489728 STAT3P40763 770 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 PRKCZQ05513 592 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 TKFCQ3LXA3 575 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 SYDE2Q5VT97 1194 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 DHX32Q7L7V1 743 aaKnown RBP12.95□□□□□ -0.34
CPSF7-212ENST00000489728 CATIPQ7Z7H3 387 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 SGMS1Q86VZ5 419 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 TRMT44Q8IYL2 757 aaKnown RBP12.95□□□□□ -0.34
CPSF7-212ENST00000489728 RASEFQ8IZ41 740 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 FBXL16Q8N461 479 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 RAET1EQ8TD07 263 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 PXYLP1Q8TE99 480 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 NUDT12Q9BQG2 462 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
CPSF7-212ENST00000489728 LY9Q9HBG7 655 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
CPSF7-212ENST00000489728 FBXO40Q9UH90 709 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 PRR12Q9ULL5 1215 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 ISY1Q9ULR0 285 aaKnown RBP12.95□□□□□ -0.34
CPSF7-212ENST00000489728 SNX14Q9Y5W7 946 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 PLXNB2O15031 1838 aa12.95□□□□□ -0.34
CPSF7-212ENST00000489728 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
CPSF7-212ENST00000489728 CALM1P0DP23 149 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 CALM2P0DP24 149 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 CALM3P0DP25 149 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 PTPREP23469 700 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 FLT3LGP49771 235 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 RCAN1P53805 252 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 ANAPC15P60006 121 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 EXOSC10Q01780 885 aaKnown RBP12.94□□□□□ -0.34
CPSF7-212ENST00000489728 TROAPQ12815 778 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 GRB14Q14449 540 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 PLS1Q14651 629 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 MORN1Q5T089 497 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 NBPF11Q86T75 865 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 USP6NLQ92738 828 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 ARMC5Q96C12 935 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 APBA2Q99767 749 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 TM6SF1Q9BZW5 370 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 GJD2Q9UKL4 321 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
CPSF7-212ENST00000489728 FRMPD2Q68DX3 1309 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-212ENST00000489728 HOXC6P09630 235 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 ERCC3P19447 782 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 RGS2P41220 211 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 GRM4Q14833 912 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 ADCK5Q3MIX3 580 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 SLC9C1Q4G0N8 1177 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 SNRNP48Q6IEG0 339 aaKnown RBP12.93□□□□□ -0.34
CPSF7-212ENST00000489728 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-212ENST00000489728 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 CHST3Q7LGC8 479 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 NCAPG2Q86XI2 1143 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 CHST13Q8NET6 341 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 IL17RAQ96F46 866 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 ABHD8Q96I13 439 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 MAF1Q9H063 256 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 SLC5A4Q9NY91 659 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 MTMR7Q9Y216 660 aa12.93□□□□□ -0.34
CPSF7-212ENST00000489728 ZNF536O15090 1300 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 PALM3A6NDB9 673 aaPredicted RBP12.92□□□□□ -0.34
CPSF7-212ENST00000489728 CCDC69A6NI79 296 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 PEX10O60683 326 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 ICAM1P05362 532 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 FCER1AP12319 257 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 SMARCA1P28370 1054 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 GRK4P32298 578 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 KIF5BP33176 963 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 TRAF1Q13077 416 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 MAP2K5Q13163 448 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 TTBK2Q6IQ55 1244 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 ZNF654Q8IZM8 581 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
CPSF7-212ENST00000489728 GPCPD1Q9NPB8 672 aa12.92□□□□□ -0.34
CPSF7-212ENST00000489728 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms