RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PRDM4Q9UKN5 801 aa20.92■□□□□ 0.94
COL16A1-215ENST00000488897 SH2B2O14492 632 aaPredicted RBP20.91■□□□□ 0.94
COL16A1-215ENST00000488897 IKBKBO14920 756 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 CELF2O95319 508 aaKnown RBP20.91■□□□□ 0.94
COL16A1-215ENST00000488897 HLA-DOAP06340 250 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 AKR1B1P15121 316 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 GABPAQ06546 454 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 DGKZQ13574 1117 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 FKBP1CQ5VVH2 108 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 CLMNQ96JQ2 1002 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 TMEM87BQ96K49 555 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 SENP2Q9HC62 589 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 TRMT1Q9NXH9 659 aaKnown RBP20.91■□□□□ 0.94
COL16A1-215ENST00000488897 MTMR7Q9Y216 660 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 ATRNL1Q5VV63 1379 aa20.91■□□□□ 0.94
COL16A1-215ENST00000488897 ZSCAN20P17040 1043 aaPredicted RBP20.9■□□□□ 0.94
COL16A1-215ENST00000488897 SYKP43405 635 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 KCNJ6P48051 423 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 SBK1Q52WX2 424 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 MFSD6Q6ZSS7 791 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 PRDM10Q9NQV6 1147 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 USP2O75604 605 aaPredicted RBP20.9■□□□□ 0.94
COL16A1-215ENST00000488897 DMTNQ08495 405 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 MKRN3Q13064 507 aaKnown RBP20.9■□□□□ 0.94
COL16A1-215ENST00000488897 TMED8Q6PL24 325 aaPredicted RBP20.9■□□□□ 0.94
COL16A1-215ENST00000488897 TMC6Q7Z403 805 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 ZSWIM5Q9P217 1185 aa20.9■□□□□ 0.94
COL16A1-215ENST00000488897 BIN1O00499 593 aa20.89■□□□□ 0.94
COL16A1-215ENST00000488897 RASA1P20936 1047 aa20.89■□□□□ 0.94
COL16A1-215ENST00000488897 MMP14P50281 582 aa20.89■□□□□ 0.94
COL16A1-215ENST00000488897 NCAPHQ15003 741 aa20.89■□□□□ 0.94
COL16A1-215ENST00000488897 KRT40Q6A162 431 aa20.89■□□□□ 0.94
COL16A1-215ENST00000488897 WRNIP1Q96S55 665 aa20.89■□□□□ 0.94
COL16A1-215ENST00000488897 TRIM34Q9BYJ4 488 aa20.89■□□□□ 0.94
COL16A1-215ENST00000488897 DHX36Q9H2U1 1008 aaKnown RBP20.89■□□□□ 0.94
COL16A1-215ENST00000488897 OGFRQ9NZT2 677 aa20.89■□□□□ 0.94
COL16A1-215ENST00000488897 CENPFP49454 3210 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 PITPNM2Q9BZ72 1349 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 SPDYE4A6NLX3 237 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 IGSF3O75054 1194 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 SFPQP23246 707 aaKnown RBP eCLIP20.89■□□□□ 0.93
COL16A1-215ENST00000488897 MARCKSP29966 332 aaPredicted RBP20.89■□□□□ 0.93
COL16A1-215ENST00000488897 GNL2Q13823 731 aaKnown RBP20.89■□□□□ 0.93
COL16A1-215ENST00000488897 C16orf86Q6ZW13 317 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 RASGRP2Q7LDG7 609 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 CERS3Q8IU89 383 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 AMOTL1Q8IY63 956 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 GTPBP4Q9BZE4 634 aaKnown RBP20.89■□□□□ 0.93
COL16A1-215ENST00000488897 TUBE1Q9UJT0 475 aa20.89■□□□□ 0.93
COL16A1-215ENST00000488897 PHF20L1A8MW92 1017 aa20.88■□□□□ 0.93
COL16A1-215ENST00000488897 TUBB4AP04350 444 aa20.88■□□□□ 0.93
COL16A1-215ENST00000488897 TFAP4Q01664 338 aa20.88■□□□□ 0.93
COL16A1-215ENST00000488897 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
COL16A1-215ENST00000488897 HPSEQ9Y251 543 aa20.88■□□□□ 0.93
COL16A1-215ENST00000488897 FAM237AA0A1B0GTK4 181 aa20.88■□□□□ 0.93
COL16A1-215ENST00000488897 GH2P01242 217 aa20.87■□□□□ 0.93
COL16A1-215ENST00000488897 ERO1AQ96HE7 468 aa20.87■□□□□ 0.93
COL16A1-215ENST00000488897 ZBTB43O43298 467 aa20.87■□□□□ 0.93
COL16A1-215ENST00000488897 ATP2B2Q01814 1243 aa20.87■□□□□ 0.93
COL16A1-215ENST00000488897 TRIM29Q14134 588 aa20.87■□□□□ 0.93
COL16A1-215ENST00000488897 PTPAQ15257 358 aa20.87■□□□□ 0.93
COL16A1-215ENST00000488897 ARMCX5Q6P1M9 558 aa20.87■□□□□ 0.93
COL16A1-215ENST00000488897 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
COL16A1-215ENST00000488897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.87■□□□□ 0.93
COL16A1-215ENST00000488897 FANCCQ00597 558 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 GRM1Q13255 1194 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 NAA30Q147X3 362 aaPredicted RBP20.86■□□□□ 0.93
COL16A1-215ENST00000488897 CERKLQ49MI3 558 aaPredicted RBP20.86■□□□□ 0.93
COL16A1-215ENST00000488897 AIFM3Q96NN9 605 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 ANAPC4Q9UJX5 808 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 TSPY2A6NKD2 308 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 NPM3O75607 178 aaKnown RBP20.86■□□□□ 0.93
COL16A1-215ENST00000488897 CDC27P30260 824 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 SEPT2Q15019 361 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 E4F1Q66K89 784 aaPredicted RBP20.86■□□□□ 0.93
COL16A1-215ENST00000488897 SGMS1Q86VZ5 419 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 IGDCC4Q8TDY8 1250 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.86■□□□□ 0.93
COL16A1-215ENST00000488897 IL17RBQ9NRM6 502 aa20.86■□□□□ 0.93
COL16A1-215ENST00000488897 ZNF215Q9UL58 517 aaPredicted RBP20.86■□□□□ 0.93
COL16A1-215ENST00000488897 CBFA2T2O43439 604 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 TOMM70O94826 608 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 ZYXQ15942 572 aaKnown RBP20.85■□□□□ 0.93
COL16A1-215ENST00000488897 SHC4Q6S5L8 630 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 NFXL1Q6ZNB6 911 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 FOXP4Q8IVH2 680 aaPredicted RBP20.85■□□□□ 0.93
COL16A1-215ENST00000488897 ZNF444Q8N0Y2 327 aaPredicted RBP20.85■□□□□ 0.93
COL16A1-215ENST00000488897 STAG1Q8WVM7 1258 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 CUTAO60888 179 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 SLU7O95391 586 aaKnown RBP20.85■□□□□ 0.93
COL16A1-215ENST00000488897 PDE4BQ07343 736 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 RESP18Q5W5W9 173 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.85■□□□□ 0.93
COL16A1-215ENST00000488897 MICU3Q86XE3 530 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 KLRG1Q96E93 195 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 MAP3K14Q99558 947 aa20.85■□□□□ 0.93
COL16A1-215ENST00000488897 CCP110O43303 1012 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 RAD21O60216 631 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 GUCY1A2P33402 732 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms