RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 RPLP2P05387 115 aaKnown RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 ZKSCAN1P17029 563 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 MARSP56192 900 aaKnown RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 PDE4CQ08493 712 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 TBCELQ5QJ74 424 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 TRAF7Q6Q0C0 670 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 LDHAL6AQ6ZMR3 332 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 C8orf58Q8NAV2 365 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 PHOSPHO2Q8TCD6 241 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 BAP1Q92560 729 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 SAMD11Q96NU1 681 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 WRNIP1Q96S55 665 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 CHMP4BQ9H444 224 aaKnown RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 SMC4Q9NTJ3 1288 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 EVA1BQ9NVM1 165 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 ADAMTS5Q9UNA0 930 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 GNEQ9Y223 722 aaKnown RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 ELP1O95163 1332 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 ZSWIM8A7E2V4 1837 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 DLL1O00548 723 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 LDHBP07195 334 aaKnown RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 GNAI3P08754 354 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 ZNF16P17020 682 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 FOXK2Q01167 660 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 ZNF697Q5TEC3 545 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 CCDC102BQ68D86 513 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 PPP1R18Q6NYC8 613 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 CDC42EP5Q6NZY7 148 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 GIMAP6Q6P9H5 292 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 PSRC1Q6PGN9 363 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 UBE3BQ7Z3V4 1068 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 PLEKHH3Q7Z736 793 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 SLC43A3Q8NBI5 491 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 GPRC5AQ8NFJ5 357 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 CLMNQ96JQ2 1002 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 FAM161BQ96MY7 647 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 R3HDMLQ9H3Y0 253 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 KCNQ5Q9NR82 932 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 CNNM1Q9NRU3 951 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 RNF19AQ9NV58 838 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 DNAAF2Q9NVR5 837 aaKnown RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 TMOD4Q9NZQ9 345 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 CXXC1Q9P0U4 656 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 PI4KBQ9UBF8 816 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 DOLKQ9UPQ8 538 aa3.35□□□□□ -1.87
DEPDC1-203ENST00000488146 FAM177BA6PVY3 158 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 ATP5J2-PTCD1G3V325 749 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 TNPO2O14787 897 aaKnown RBP3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 NCK2O43639 380 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 CAND2O75155 1236 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 BAG3O95817 575 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 CYBAP13498 195 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 CAP2P40123 477 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 PIP4K2AP48426 406 aaPredicted RBP3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 AIMP1Q12904 312 aaKnown RBP3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 PPIGQ13427 754 aaKnown RBP eCLIP3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 EML3Q32P44 896 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 TAF7LQ5H9L4 462 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 MAMDC4Q6UXC1 1216 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 KIAA0825Q8IV33 1275 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 MORC4Q8TE76 937 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 CCDC17Q96LX7 622 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 DDX20Q9UHI6 824 aaKnown RBP3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 ADAMTS8Q9UP79 889 aa3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 NOP58Q9Y2X3 529 aaKnown RBP3.34□□□□□ -1.87
DEPDC1-203ENST00000488146 TNFRSF10AO00220 468 aa3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 BACE1P56817 501 aa3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 PTK2Q05397 1052 aa3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 COL19A1Q14993 1142 aa3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 OCLNQ16625 522 aa3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 SLC17A8Q8NDX2 589 aa3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 HERVK_113Q902F9 699 aa3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 PHAXQ9H814 394 aaKnown RBP3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 MIS18AQ9NYP9 233 aa3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 LRRFIP2Q9Y608 721 aaKnown RBP3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 V9GY48 417 aaPredicted RBP3.34□□□□□ -1.88
DEPDC1-203ENST00000488146 ZBED9Q6R2W3 1325 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 MYH1P12882 1939 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 NRG2O14511 850 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 SEPT4O43236 478 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 DXOO77932 396 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 BAIAP3O94812 1187 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 DKK1O94907 266 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 TFRCP02786 760 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 RHBDL3P58872 404 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 PRKCZQ05513 592 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 FKBP5Q13451 457 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 ELOAQ14241 798 aaKnown RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 METTL24Q5JXM2 366 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 LMBR1LQ6UX01 489 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 TXNRD3Q86VQ6 643 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 SESTD1Q86VW0 696 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 ERC1Q8IUD2 1116 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 PLEKHM2Q8IWE5 1019 aa3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 RPAP2Q8IXW5 612 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 LBHD1Q9BQE6 289 aaPredicted RBP3.33□□□□□ -1.88
DEPDC1-203ENST00000488146 NOL10Q9BSC4 688 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms