RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	EVI5	O60447	810 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	CNMD	O75829	334 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	COG2	Q14746	738 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	RRP12	Q5JTH9	1297 aa	Known RBP	11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	RCSD1	Q6JBY9	416 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	LRRC47	Q8N1G4	583 aa	Known RBP	11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	ESR2	Q92731	530 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	EFCC1	Q9HA90	598 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	ZSWIM5	Q9P217	1185 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	ADAMTS5	Q9UNA0	930 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	TRIM17	Q9Y577	477 aa		11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	RBM8A	Q9Y5S9	174 aa	Known RBP	11.72	□□□□□ -0.53
CHEK2-221	ENST00000456369	CASP8AP2	Q9UKL3	1982 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	KDM4A	O75164	1064 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	REC8	O95072	547 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	GNRH1	P01148	92 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	PSMC4	P43686	418 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	NECTIN1	Q15223	517 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369		Q3C1V9	767 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	PPP4R3B	Q5MIZ7	849 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	FAM83B	Q5T0W9	1011 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	STOX1	Q6ZVD7	989 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	GPRC5A	Q8NFJ5	357 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	GMCL1	Q96IK5	515 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	NUP88	Q99567	741 aa	Predicted RBP	11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	TANGO6	Q9C0B7	1094 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	TOMM22	Q9NS69	142 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	FBXO28	Q9NVF7	368 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	HOXC10	Q9NYD6	342 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	BTBD7	Q9P203	1132 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	STX8	Q9UNK0	236 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	PTPN22	Q9Y2R2	807 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	RABGAP1	Q9Y3P9	1069 aa		11.71	□□□□□ -0.53
CHEK2-221	ENST00000456369	BRCA2	P51587	3418 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	MYPN	Q86TC9	1320 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369		B4E1Z4	1266 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	FLOT1	O75955	427 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	FCGRT	P55899	365 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	ERVK-9	P63128	1117 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	ERVK-24	P63145	666 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	KIF22	Q14807	665 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	KIAA1211	Q6ZU35	1233 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	DGKH	Q86XP1	1220 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	IL27	Q8NEV9	243 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	ANKS1A	Q92625	1134 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	TTC14	Q96N46	770 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	TMEM47	Q9BQJ4	181 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	ANP32E	Q9BTT0	268 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	KRT23	Q9C075	422 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	CNNM2	Q9H8M5	875 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	ANO2	Q9NQ90	1003 aa		11.7	□□□□□ -0.54
CHEK2-221	ENST00000456369	FAM205C	A6NFA0	338 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369		E7EWF7	191 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	FMNL1	O95466	1100 aa	Predicted RBP	11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	TOP1	P11387	765 aa	Known RBP	11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	ARHGEF6	Q15052	776 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	SLFN13	Q68D06	897 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	CYB5R4	Q7L1T6	521 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	REPS2	Q8NFH8	660 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	ATG4C	Q96DT6	458 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	ABHD8	Q96I13	439 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	PORCN	Q9H237	461 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	SRRD	Q9UH36	339 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	PPP1R9A	Q9ULJ8	1098 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	HPS5	Q9UPZ3	1129 aa		11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.69	□□□□□ -0.54
CHEK2-221	ENST00000456369	LAMA4	Q16363	1823 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	VWA5A	O00534	786 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	SLC27A2	O14975	620 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	RAD21	O60216	631 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	SNHG28	P0DPA3	235 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	BMP3	P12645	472 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	MCC	P23508	829 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	PRMT2	P55345	433 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	PRKCZ	Q05513	592 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	COL9A3	Q14050	684 aa	Predicted RBP	11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	CREB3L3	Q68CJ9	461 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	RASGRP2	Q7LDG7	609 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	IQCA1	Q86XH1	822 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	MB21D1	Q8N884	522 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	ENAH	Q8N8S7	591 aa	Predicted RBP	11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	SNX21	Q969T3	373 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	ZKSCAN3	Q9BRR0	538 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	PAGR1	Q9BTK6	254 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	FEM1B	Q9UK73	627 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	GJD2	Q9UKL4	321 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	GABRQ	Q9UN88	632 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	LHX6	Q9UPM6	363 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	PTCH2	Q9Y6C5	1203 aa		11.68	□□□□□ -0.54
CHEK2-221	ENST00000456369	TNKS	O95271	1327 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	MYH8	P13535	1937 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	TNPO2	O14787	897 aa	Known RBP	11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	PLA2G6	O60733	806 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	PDHB	P11177	359 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	SLC1A4	P43007	532 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	IRF5	Q13568	498 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	TMEM132B	Q14DG7	1078 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms