RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 SNRPB2P08579 225 aaKnown RBP9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 ITIH2P19823 946 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 KIR3DL1P43629 444 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 PPP2R5DQ14738 602 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 CWF19L1Q69YN2 538 aaKnown RBP9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 GTF2IRD2BQ6EKJ0 949 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 CDPF1Q6NVV7 123 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 PAOXQ6QHF9 649 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 GTF2IRD2Q86UP8 949 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 PTPRN2Q92932 1015 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 FAM46AQ96IP4 442 aaKnown RBP9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 NKX2-4Q9H2Z4 354 aa9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 PRDM5Q9NQX1 630 aaPredicted RBP9.57□□□□□ -0.88
SMC4P1-201ENST00000414479 FAM95CA0A1B0GW59 222 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 GSG1L2A8MUP6 293 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 B4E1Z4 1266 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 NPTXRO95502 500 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 GRIA2P42262 883 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 EXOSC10Q01780 885 aaKnown RBP9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 POU4F1Q01851 419 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 ODR4Q5SWX8 454 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 DDX46Q7L014 1031 aaKnown RBP9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 RNF180Q86T96 592 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 TOP6BLQ8N6T0 577 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 ATL2Q8NHH9 583 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 BRF1Q92994 677 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 MYRFLQ96LU7 910 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 TARS2Q9BW92 718 aaKnown RBP9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 PCGF6Q9BYE7 350 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 CYP26B1Q9NR63 512 aa9.56□□□□□ -0.88
SMC4P1-201ENST00000414479 COL17A1Q9UMD9 1497 aaPredicted RBP9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 TBX1O43435 398 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 ARHGEF15O94989 841 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 ASLP04424 464 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 BMP3P12645 472 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 GFRA1P56159 465 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 SGO2Q562F6 1265 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 SFRP5Q5T4F7 317 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 CCDC136Q96JN2 1154 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 ZDHHC15Q96MV8 337 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 CLUHP3Q96NS8 147 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 PSMG3-AS1Q96PY0 264 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 PRDM14Q9GZV8 571 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 LGR6Q9HBX8 967 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 GFOD1Q9NXC2 390 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 GTF2IRD1Q9UHL9 959 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 RNF112Q9ULX5 631 aa9.55□□□□□ -0.88
SMC4P1-201ENST00000414479 AQP7O14520 342 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 SIGLEC6O43699 453 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 OPA1O60313 960 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 DLX3O60479 287 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 CAPNS1P04632 268 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 IGFALSP35858 605 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 BRAPQ7Z569 592 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 ALYREFQ86V81 257 aaKnown RBP9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 RIN3Q8TB24 985 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 STAG1Q8WVM7 1258 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 DDX1Q92499 740 aaKnown RBP9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 MAGEB10Q96LZ2 347 aaPredicted RBP9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 LGR4Q9BXB1 951 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 KCNF1Q9H3M0 494 aa9.54□□□□□ -0.88
SMC4P1-201ENST00000414479 SCG5P05408 212 aa9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 GSNP06396 782 aa9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 IREB2P48200 963 aaKnown RBP9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 NEK4P51957 841 aa9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 UBE2R2Q712K3 238 aaPredicted RBP9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 DDX42Q86XP3 938 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 GSTCDQ8NEC7 633 aa9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 SLC52A2Q9HAB3 445 aa9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 CHST7Q9NS84 486 aa9.53□□□□□ -0.88
SMC4P1-201ENST00000414479 C6orf222P0C671 652 aaPredicted RBP9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 NOS3P29474 1203 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 NMIQ13287 307 aaPredicted RBP9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 CDK5R2Q13319 367 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 NFKBIBQ15653 356 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 CLEC16AQ2KHT3 1053 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 JAMLQ86YT9 394 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 FAM20CQ8IXL6 584 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 ENOX1Q8TC92 643 aaKnown RBP9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 DCAF4Q8WV16 495 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 JDP2Q8WYK2 163 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 DUSP23Q9BVJ7 150 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 TRIM39Q9HCM9 518 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 TCEAL9Q9UHQ7 104 aa9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 GPR55Q9Y2T6 319 aaPredicted RBP9.52□□□□□ -0.89
SMC4P1-201ENST00000414479 DHX15O43143 795 aaKnown RBP9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 DNAJC8O75937 253 aaPredicted RBP9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 SDSP20132 328 aa9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 POU3F2P20265 443 aaPredicted RBP9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 ECI1P42126 302 aa9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 NOP2P46087 812 aaKnown RBP9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 CDKN1CP49918 316 aaPredicted RBP9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 USP53Q70EK8 1073 aa9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 AFAP1L2Q8N4X5 818 aa9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 UBR7Q8N806 425 aa9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 DTWD2Q8NBA8 298 aa9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 PIWIL2Q8TC59 973 aaKnown RBP9.51□□□□□ -0.89
SMC4P1-201ENST00000414479 UBL7Q96S82 380 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms