RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 KRT32Q14532 448 aa26.21■■□□□ 1.79
PTCD3-203ENST00000409783 WTAPQ15007 396 aa26.21■■□□□ 1.79
PTCD3-203ENST00000409783 TMEM67Q5HYA8 995 aa26.21■■□□□ 1.79
PTCD3-203ENST00000409783 LY9Q9HBG7 655 aa26.21■■□□□ 1.79
PTCD3-203ENST00000409783 PTCH2Q9Y6C5 1203 aa26.21■■□□□ 1.79
PTCD3-203ENST00000409783 SH2B2O14492 632 aaPredicted RBP26.2■■□□□ 1.78
PTCD3-203ENST00000409783 ATP2A1O14983 1001 aa26.2■■□□□ 1.78
PTCD3-203ENST00000409783 HOXD10P28358 340 aa26.2■■□□□ 1.78
PTCD3-203ENST00000409783 SART3Q15020 963 aaKnown RBP26.2■■□□□ 1.78
PTCD3-203ENST00000409783 GPR142Q7Z601 462 aa26.2■■□□□ 1.78
PTCD3-203ENST00000409783 SHCBP1Q8NEM2 672 aa26.2■■□□□ 1.78
PTCD3-203ENST00000409783 COA7Q96BR5 231 aa26.2■■□□□ 1.78
PTCD3-203ENST00000409783 GPCPD1Q9NPB8 672 aa26.2■■□□□ 1.78
PTCD3-203ENST00000409783 PRR12Q9ULL5 1215 aa26.2■■□□□ 1.78
PTCD3-203ENST00000409783 ISY1Q9ULR0 285 aaKnown RBP26.2■■□□□ 1.78
PTCD3-203ENST00000409783 ERICH2A1L162 156 aa26.19■■□□□ 1.78
PTCD3-203ENST00000409783 SLC16A2P36021 539 aa26.19■■□□□ 1.78
PTCD3-203ENST00000409783 RIOX2Q8IUF8 465 aa26.19■■□□□ 1.78
PTCD3-203ENST00000409783 TMEM87BQ96K49 555 aa26.19■■□□□ 1.78
PTCD3-203ENST00000409783 WDR19Q8NEZ3 1342 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 ZBED4O75132 1171 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 GOLGA8HP0CJ92 632 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 FDX1P10109 184 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 ERCC3P19447 782 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 STAT3P40763 770 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 FLT3LGP49771 235 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 PLS1Q14651 629 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 C8orf34Q49A92 452 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 GPATCH4Q5T3I0 446 aaKnown RBP26.18■■□□□ 1.78
PTCD3-203ENST00000409783 PLEKHH3Q7Z736 793 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 USP6NLQ92738 828 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 HPS5Q9UPZ3 1129 aa26.18■■□□□ 1.78
PTCD3-203ENST00000409783 ZNF536O15090 1300 aa26.17■■□□□ 1.78
PTCD3-203ENST00000409783 SEC24BO95487 1268 aa26.17■■□□□ 1.78
PTCD3-203ENST00000409783 TROAPQ12815 778 aa26.17■■□□□ 1.78
PTCD3-203ENST00000409783 IKQ13123 557 aaPredicted RBP26.17■■□□□ 1.78
PTCD3-203ENST00000409783 MORN1Q5T089 497 aa26.17■■□□□ 1.78
PTCD3-203ENST00000409783 SYDE2Q5VT97 1194 aa26.17■■□□□ 1.78
PTCD3-203ENST00000409783 DHX32Q7L7V1 743 aaKnown RBP26.17■■□□□ 1.78
PTCD3-203ENST00000409783 LRRC2Q9BYS8 371 aa26.17■■□□□ 1.78
PTCD3-203ENST00000409783 SMCHD1A6NHR9 2005 aa26.17■■□□□ 1.78
PTCD3-203ENST00000409783 ZNFX1Q9P2E3 1918 aaKnown RBP26.16■■□□□ 1.78
PTCD3-203ENST00000409783 LIFRP42702 1097 aa26.16■■□□□ 1.78
PTCD3-203ENST00000409783 IRF5Q13568 498 aa26.16■■□□□ 1.78
PTCD3-203ENST00000409783 ASPRV1Q53RT3 343 aa26.16■■□□□ 1.78
PTCD3-203ENST00000409783 ABHD8Q96I13 439 aa26.16■■□□□ 1.78
PTCD3-203ENST00000409783 TEX13BQ9BXU2 312 aa26.16■■□□□ 1.78
PTCD3-203ENST00000409783 MROH8Q9H579 483 aa26.16■■□□□ 1.78
PTCD3-203ENST00000409783 RAVER2Q9HCJ3 691 aaKnown RBP26.16■■□□□ 1.78
PTCD3-203ENST00000409783 RIPK3Q9Y572 518 aa26.16■■□□□ 1.78
PTCD3-203ENST00000409783 ZNF236Q9UL36 1845 aa26.16■■□□□ 1.78
PTCD3-203ENST00000409783 SLC25A27O95847 323 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 PTPREP23469 700 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 OAZ1P54368 228 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 SNAP25P60880 206 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 CCAR1Q8IX12 1150 aaKnown RBP26.15■■□□□ 1.78
PTCD3-203ENST00000409783 CPXCR1Q8N123 301 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 STAG2Q8N3U4 1231 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 TCEANC2Q96MN5 208 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 JAKMIP1Q96N16 626 aaKnown RBP26.15■■□□□ 1.78
PTCD3-203ENST00000409783 RANBP17Q9H2T7 1088 aaKnown RBP26.15■■□□□ 1.78
PTCD3-203ENST00000409783 CPVLQ9H3G5 476 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 MAD2L2Q9UI95 211 aa26.15■■□□□ 1.78
PTCD3-203ENST00000409783 PALM3A6NDB9 673 aaPredicted RBP26.14■■□□□ 1.78
PTCD3-203ENST00000409783 HMGB1P09429 215 aaKnown RBP26.14■■□□□ 1.78
PTCD3-203ENST00000409783 PARP1P09874 1014 aaKnown RBP26.14■■□□□ 1.78
PTCD3-203ENST00000409783 CPA1P15085 419 aa26.14■■□□□ 1.78
PTCD3-203ENST00000409783 GRM4Q14833 912 aa26.14■■□□□ 1.78
PTCD3-203ENST00000409783 SNRNP48Q6IEG0 339 aaKnown RBP26.14■■□□□ 1.78
PTCD3-203ENST00000409783 NCAPG2Q86XI2 1143 aa26.14■■□□□ 1.78
PTCD3-203ENST00000409783 UBA5Q9GZZ9 404 aa26.14■■□□□ 1.78
PTCD3-203ENST00000409783 SLC15A5A6NIM6 579 aa26.13■■□□□ 1.77
PTCD3-203ENST00000409783 GRB14Q14449 540 aa26.13■■□□□ 1.77
PTCD3-203ENST00000409783 WDR78Q5VTH9 848 aa26.13■■□□□ 1.77
PTCD3-203ENST00000409783 SGMS1Q86VZ5 419 aa26.13■■□□□ 1.77
PTCD3-203ENST00000409783 ZNF654Q8IZM8 581 aa26.13■■□□□ 1.77
PTCD3-203ENST00000409783 TMTC2Q8N394 836 aa26.13■■□□□ 1.77
PTCD3-203ENST00000409783 RAET1EQ8TD07 263 aa26.13■■□□□ 1.77
PTCD3-203ENST00000409783 NUDT12Q9BQG2 462 aa26.13■■□□□ 1.77
PTCD3-203ENST00000409783 CATIPQ7Z7H3 387 aa26.12■■□□□ 1.77
PTCD3-203ENST00000409783 SOCS4Q8WXH5 440 aa26.12■■□□□ 1.77
PTCD3-203ENST00000409783 AGBL1Q96MI9 1066 aa26.12■■□□□ 1.77
PTCD3-203ENST00000409783 CTDP1Q9Y5B0 961 aaPredicted RBP26.12■■□□□ 1.77
PTCD3-203ENST00000409783 STRNO43815 780 aa26.11■■□□□ 1.77
PTCD3-203ENST00000409783 COPB2P35606 906 aa26.11■■□□□ 1.77
PTCD3-203ENST00000409783 SLC35G1Q2M3R5 365 aa26.11■■□□□ 1.77
PTCD3-203ENST00000409783 BLOC1S2Q6QNY1 142 aa26.11■■□□□ 1.77
PTCD3-203ENST00000409783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.11■■□□□ 1.77
PTCD3-203ENST00000409783 ARMC5Q96C12 935 aa26.11■■□□□ 1.77
PTCD3-203ENST00000409783 MAP3K14Q99558 947 aa26.11■■□□□ 1.77
PTCD3-203ENST00000409783 MYL10Q9BUA6 226 aa26.11■■□□□ 1.77
PTCD3-203ENST00000409783 ADCY3O60266 1144 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 DDAH1O94760 285 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 RPS6KB1P23443 525 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 PSMA5P28066 241 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 MAP2K5Q13163 448 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 CCDC174Q6PII3 467 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 ABRAQ8N0Z2 381 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 PXYLP1Q8TE99 480 aa26.1■■□□□ 1.77
PTCD3-203ENST00000409783 CWC22Q9HCG8 908 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms