RNA–Protein interactions for RNA: ENST00000380751.9

SERF1B-202, Transcript of small EDRK-rich factor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1B, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-202ENST00000380751 APPBP2Q92624 585 aa20.84■□□□□ 0.93
SERF1B-202ENST00000380751 DDX11Q96FC9 970 aa20.84■□□□□ 0.93
SERF1B-202ENST00000380751 TEX13BQ9BXU2 312 aa20.84■□□□□ 0.93
SERF1B-202ENST00000380751 SEMA6BQ9H3T3 888 aa20.84■□□□□ 0.93
SERF1B-202ENST00000380751 ZNFX1Q9P2E3 1918 aaKnown RBP20.84■□□□□ 0.93
SERF1B-202ENST00000380751 PARP14Q460N5 1801 aa20.83■□□□□ 0.93
SERF1B-202ENST00000380751 A0A1W2PQ45 241 aaPredicted RBP20.83■□□□□ 0.93
SERF1B-202ENST00000380751 A0A1W2PQY0 241 aa20.83■□□□□ 0.93
SERF1B-202ENST00000380751 ADAMTS4O75173 837 aa20.83■□□□□ 0.93
SERF1B-202ENST00000380751 SNAI1O95863 264 aaPredicted RBP20.83■□□□□ 0.93
SERF1B-202ENST00000380751 CLTBP09497 229 aa20.83■□□□□ 0.93
SERF1B-202ENST00000380751 ZNF444Q8N0Y2 327 aaPredicted RBP20.83■□□□□ 0.93
SERF1B-202ENST00000380751 CDX2Q99626 313 aaPredicted RBP20.83■□□□□ 0.93
SERF1B-202ENST00000380751 COL11A1P12107 1806 aaPredicted RBP20.83■□□□□ 0.92
SERF1B-202ENST00000380751 LTBP2Q14767 1821 aa20.83■□□□□ 0.92
SERF1B-202ENST00000380751 SMCHD1A6NHR9 2005 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 IGKV6D-41A0A0C4DH26 115 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 GPAA1O43292 621 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 PQBP1O60828 265 aaKnown RBP20.82■□□□□ 0.92
SERF1B-202ENST00000380751 ZBED4O75132 1171 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 PRDM1O75626 825 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 APPP05067 770 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 EPHB4P54760 987 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.82■□□□□ 0.92
SERF1B-202ENST00000380751 MSL3Q8N5Y2 521 aaKnown RBP20.82■□□□□ 0.92
SERF1B-202ENST00000380751 DCTPP1Q9H773 170 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 RAVER2Q9HCJ3 691 aaKnown RBP20.82■□□□□ 0.92
SERF1B-202ENST00000380751 EPB41L4AQ9HCS5 686 aaPredicted RBP20.82■□□□□ 0.92
SERF1B-202ENST00000380751 FAM184BQ9ULE4 1060 aa20.82■□□□□ 0.92
SERF1B-202ENST00000380751 UNC80Q8N2C7 3258 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 DNAJC25-GNG10A0A024R161 153 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 M0R2C6 588 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 RAG1P15918 1043 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 TDO2P48775 406 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 MAMDC4Q6UXC1 1216 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 MKL1Q969V6 931 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 KIFC2Q96AC6 838 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 TSEN34Q9BSV6 310 aaKnown RBP20.81■□□□□ 0.92
SERF1B-202ENST00000380751 TMEM39AQ9NV64 488 aa20.81■□□□□ 0.92
SERF1B-202ENST00000380751 CTDP1Q9Y5B0 961 aaPredicted RBP20.81■□□□□ 0.92
SERF1B-202ENST00000380751 SYNGAP1Q96PV0 1343 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 PATL2C9JE40 543 aaKnown RBP20.8■□□□□ 0.92
SERF1B-202ENST00000380751 ATP2A1O14983 1001 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 KIAA0355O15063 1070 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 ACLYP53396 1101 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 SMAD3P84022 425 aaKnown RBP20.8■□□□□ 0.92
SERF1B-202ENST00000380751 KCNA10Q16322 511 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 KLHDC9Q8NEP7 349 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 CEP95Q96GE4 821 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 GPATCH3Q96I76 525 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 COL25A1Q9BXS0 654 aaPredicted RBP20.8■□□□□ 0.92
SERF1B-202ENST00000380751 STARD7Q9NQZ5 370 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 ZHX1Q9UKY1 873 aaPredicted RBP20.8■□□□□ 0.92
SERF1B-202ENST00000380751 ROBO3Q96MS0 1386 aa20.8■□□□□ 0.92
SERF1B-202ENST00000380751 SYNRGQ9UMZ2 1314 aa20.79■□□□□ 0.92
SERF1B-202ENST00000380751 ZFYP08048 801 aaPredicted RBP20.79■□□□□ 0.92
SERF1B-202ENST00000380751 GNAT2P19087 354 aa20.79■□□□□ 0.92
SERF1B-202ENST00000380751 IRX5P78411 483 aaPredicted RBP20.79■□□□□ 0.92
SERF1B-202ENST00000380751 FAAP100Q0VG06 881 aa20.79■□□□□ 0.92
SERF1B-202ENST00000380751 CCSAPQ6IQ19 270 aaPredicted RBP20.79■□□□□ 0.92
SERF1B-202ENST00000380751 IFNL3Q8IZI9 196 aa20.79■□□□□ 0.92
SERF1B-202ENST00000380751 SEC62Q99442 399 aaKnown RBP20.79■□□□□ 0.92
SERF1B-202ENST00000380751 TTYH1Q9H313 450 aaPredicted RBP20.79■□□□□ 0.92
SERF1B-202ENST00000380751 SLC38A10Q9HBR0 1119 aa20.79■□□□□ 0.92
SERF1B-202ENST00000380751 MTMR4Q9NYA4 1195 aa20.79■□□□□ 0.92
SERF1B-202ENST00000380751 MYADML2A6NDP7 307 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 ACVR2BQ13705 512 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 ANKRD33Q7Z3H0 272 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 ZNF467Q7Z7K2 595 aaPredicted RBP20.78■□□□□ 0.92
SERF1B-202ENST00000380751 LRRC47Q8N1G4 583 aaKnown RBP20.78■□□□□ 0.92
SERF1B-202ENST00000380751 ANKRD35Q8N283 1001 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 NUP133Q8WUM0 1156 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 TOX2Q96NM4 488 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 ZNF287Q9HBT7 754 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 FEM1BQ9UK73 627 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 MYH7P12883 1935 aa20.78■□□□□ 0.92
SERF1B-202ENST00000380751 MOXD2PA6NHM9 499 aa20.77■□□□□ 0.92
SERF1B-202ENST00000380751 DCDC2CA8MYV0 355 aa20.77■□□□□ 0.92
SERF1B-202ENST00000380751 DUSP11O75319 330 aaKnown RBP20.77■□□□□ 0.92
SERF1B-202ENST00000380751 TTLL1O95922 423 aa20.77■□□□□ 0.92
SERF1B-202ENST00000380751 MYLIPQ8WY64 445 aa20.77■□□□□ 0.92
SERF1B-202ENST00000380751 RNPC3Q96LT9 517 aaKnown RBP20.77■□□□□ 0.92
SERF1B-202ENST00000380751 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.77■□□□□ 0.92
SERF1B-202ENST00000380751 GREB1LQ9C091 1923 aaPredicted RBP20.76■□□□□ 0.91
SERF1B-202ENST00000380751 PLXNA1Q9UIW2 1896 aa20.76■□□□□ 0.91
SERF1B-202ENST00000380751 ADCY6O43306 1168 aa20.76■□□□□ 0.91
SERF1B-202ENST00000380751 FPGSQ05932 587 aa20.76■□□□□ 0.91
SERF1B-202ENST00000380751 SLFN13Q68D06 897 aa20.76■□□□□ 0.91
SERF1B-202ENST00000380751 CHST13Q8NET6 341 aa20.76■□□□□ 0.91
SERF1B-202ENST00000380751 FGD4Q96M96 766 aa20.76■□□□□ 0.91
SERF1B-202ENST00000380751 ABHD16BQ9H3Z7 469 aa20.76■□□□□ 0.91
SERF1B-202ENST00000380751 C6orf222P0C671 652 aaPredicted RBP20.75■□□□□ 0.91
SERF1B-202ENST00000380751 BMP3P12645 472 aa20.75■□□□□ 0.91
SERF1B-202ENST00000380751 HOXD11P31277 338 aaPredicted RBP20.75■□□□□ 0.91
SERF1B-202ENST00000380751 TFAP4Q01664 338 aa20.75■□□□□ 0.91
SERF1B-202ENST00000380751 CCDC144BQ3MJ40 725 aa20.75■□□□□ 0.91
SERF1B-202ENST00000380751 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.75■□□□□ 0.91
SERF1B-202ENST00000380751 GMCL1P1Q8NEA9 526 aa20.75■□□□□ 0.91
SERF1B-202ENST00000380751 NEDD1Q8NHV4 660 aa20.75■□□□□ 0.91
SERF1B-202ENST00000380751 CHMP4CQ96CF2 233 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms