RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 EZRP15311 586 aaKnown RBP10.84□□□□□ -0.67
GABPA-201ENST00000354828 GMPSP49915 693 aaPredicted RBP10.84□□□□□ -0.67
GABPA-201ENST00000354828 LIG4P49917 911 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 FAM200AQ8TCP9 573 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 NOX5Q96PH1 765 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 ZNF577Q9BSK1 485 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 TM6SF1Q9BZW5 370 aa10.84□□□□□ -0.67
GABPA-201ENST00000354828 ZMYM6O95789 1325 aa10.83□□□□□ -0.67
GABPA-201ENST00000354828 CYP4A11Q02928 519 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 ANGEL2Q5VTE6 544 aaKnown RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 KIFAP3Q92845 792 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 ATP6V0A1Q93050 837 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 ZBED2Q9BTP6 218 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 GGA3Q9NZ52 723 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 ZNF215Q9UL58 517 aaPredicted RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 KIAA1210Q9ULL0 1709 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 USP42Q9H9J4 1324 aaKnown RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 SEC24BO95487 1268 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 PLCB3Q01970 1234 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 LRCH2Q5VUJ6 765 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 OTUD6BQ8N6M0 293 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 RDH13Q8NBN7 331 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 RETREG2Q8NC44 543 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 JADE2Q9NQC1 790 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 EIF2AK2P19525 551 aaKnown RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 SNAP25P60880 206 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 STRIP1Q5VSL9 837 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 GPBP1Q86WP2 473 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 IWS1Q96ST2 819 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 CCDC113Q9H0I3 377 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 CTNND2Q9UQB3 1225 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 TNPO2O14787 897 aaKnown RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 CELF2O95319 508 aaKnown RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 MYL3P08590 195 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 MRPS9P82933 396 aaKnown RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 TFDP1Q14186 410 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 RASA3Q14644 834 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 SEPT2Q15019 361 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.83□□□□□ -0.68
GABPA-201ENST00000354828 FBXO40Q9UH90 709 aa10.83□□□□□ -0.68
GABPA-201ENST00000354828 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 GSPT1P15170 499 aaKnown RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 KRT9P35527 623 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 CCDC50Q8IVM0 306 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 SLF1Q9BQI6 1058 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 NOC4LQ9BVI4 516 aaKnown RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 MROH7-TTC4A0A0A0MT08 1334 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 TRIM28Q13263 835 aaKnown RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 CDC37Q16543 378 aaPredicted RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 MIS18BP1Q6P0N0 1132 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 RNF207Q6ZRF8 634 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 STAMQ92783 540 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 JPH2Q9BR39 696 aaPredicted RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 OR52Z1P0C646 297 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 ZSCAN20P17040 1043 aaPredicted RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 SNX16P57768 344 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 SETQ01105 290 aaPredicted RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 FAM84BQ96KN1 310 aaPredicted RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 KIF2AO00139 706 aaPredicted RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 ABL1P00519 1130 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 CYP2D6P10635 497 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 P4HA1P13674 534 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 RNASELQ05823 741 aaKnown RBP10.82□□□□□ -0.68
GABPA-201ENST00000354828 FAM160A1Q05DH4 1040 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 SCARF1Q14162 830 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 KLHL40Q2TBA0 621 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 MFSD14CQ5VZR4 134 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 GTF3C6Q969F1 213 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 CCDC42Q96M95 316 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 NUB1Q9Y5A7 615 aa10.82□□□□□ -0.68
GABPA-201ENST00000354828 PSMD14O00487 310 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 HLTFQ14527 1009 aaKnown RBP eCLIP10.81□□□□□ -0.68
GABPA-201ENST00000354828 KIAA0753Q2KHM9 967 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 SNRNP48Q6IEG0 339 aaKnown RBP10.81□□□□□ -0.68
GABPA-201ENST00000354828 CDC37L1Q7L3B6 337 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 ZNF34Q8IZ26 560 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 CSGALNACT2Q8N6G5 542 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 STAP2Q9UGK3 403 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 H0YCG3 227 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 ADCY5O95622 1261 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 ERCC3P19447 782 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 ZNF589Q86UQ0 364 aaPredicted RBP10.81□□□□□ -0.68
GABPA-201ENST00000354828 UBXN4Q92575 508 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 FTOQ9C0B1 505 aaKnown RBP eCLIP10.81□□□□□ -0.68
GABPA-201ENST00000354828 INO80B-WBP1J3KQ70 363 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 PRPHP41219 470 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 DMP1Q13316 513 aaPredicted RBP10.81□□□□□ -0.68
GABPA-201ENST00000354828 SF3B3Q15393 1217 aaKnown RBP10.81□□□□□ -0.68
GABPA-201ENST00000354828 ME3Q16798 604 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 PRAMEF18Q5VWM3 479 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 NOSTRINQ8IVI9 506 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 PGBD1Q96JS3 809 aa10.81□□□□□ -0.68
GABPA-201ENST00000354828 NAA15Q9BXJ9 866 aaKnown RBP10.81□□□□□ -0.68
GABPA-201ENST00000354828 INO80BQ9C086 356 aaPredicted RBP10.81□□□□□ -0.68
GABPA-201ENST00000354828 RAVER2Q9HCJ3 691 aaKnown RBP10.81□□□□□ -0.68
GABPA-201ENST00000354828 LARSQ9P2J5 1176 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms