RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 NPY5RQ15761 445 aa16.98■□□□□ 0.31
CDK5RAP3-201ENST00000338399 NOSTRINQ8IVI9 506 aa16.98■□□□□ 0.31
CDK5RAP3-201ENST00000338399 USP28Q96RU2 1077 aa16.98■□□□□ 0.31
CDK5RAP3-201ENST00000338399 FTOQ9C0B1 505 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDK5RAP3-201ENST00000338399 SCAND2PQ9GZW5 306 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PICK1Q9NRD5 415 aa16.98■□□□□ 0.31
CDK5RAP3-201ENST00000338399 CFAP45Q9UL16 551 aa16.98■□□□□ 0.31
CDK5RAP3-201ENST00000338399 CSPP1Q1MSJ5 1256 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 FAM83BQ5T0W9 1011 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 SPATA32Q96LK8 384 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 BRMS1Q9HCU9 246 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PNMA6FA0A0J9YX94 578 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 GADD45BO75293 160 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PTPRAP18433 802 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 ATL3Q6DD88 541 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 CCDC148Q8NFR7 591 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 MTMR8Q96EF0 704 aa16.97■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 ZBTB5O15062 677 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 ADAMTS3O15072 1205 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 PPP1R12BO60237 982 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 CALML3P27482 149 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 NAPAP54920 295 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 TPRNQ4KMQ1 711 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 SYDE2Q5VT97 1194 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 BTNL9Q6UXG8 535 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 COA7Q96BR5 231 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 RRAGCQ9HB90 399 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 AS3MTQ9HBK9 375 aa16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 DDX49Q9Y6V7 483 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-201ENST00000338399 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 SPP2Q13103 211 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 KIAA1683Q9H0B3 1180 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PCDHA4Q9UN74 947 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 CLIC4Q9Y696 253 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 hCG_1984214I3L0E3 225 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 NF2P35240 595 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 STAT2P52630 851 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 MAP3K9P80192 1104 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 DGKZQ13574 1117 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 MTMR2Q13614 643 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 SKOR2Q2VWA4 1001 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 BLIDQ8IZY5 108 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ZNF713Q8N859 430 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 WDR18Q9BV38 432 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ZHX2Q9Y6X8 837 aa16.95■□□□□ 0.3
CDK5RAP3-201ENST00000338399 OTOFQ9HC10 1997 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ELP1O95163 1332 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 SNAP25P60880 206 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 QRICH1Q2TAL8 776 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 EARS2Q5JPH6 523 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ZNF280CQ8ND82 737 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 GPT2Q8TD30 523 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 TNFRSF25Q93038 417 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ZMYND12Q9H0C1 365 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 RTEL1Q9NZ71 1219 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PRR12Q9ULL5 1215 aa16.94■□□□□ 0.3
CDK5RAP3-201ENST00000338399 PAPPA2Q9BXP8 1791 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 FAM205CA6NFA0 338 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 SMCO2A6NFE2 343 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 IREB2P48200 963 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 VGLL4Q14135 290 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 NOM1Q5C9Z4 860 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 POLR3EQ9NVU0 708 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 RCOR1Q9UKL0 485 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 TRIM75PA6NK02 468 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 TOB1P50616 345 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 USP14P54578 494 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 BACE1P56817 501 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 UBE2HP62256 183 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 ANO1Q5XXA6 986 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 MAP1SQ66K74 1059 aaPredicted RBP16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 GALNT17Q6IS24 598 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 DAGLBQ8NCG7 672 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 RASGRP4Q8TDF6 673 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 CHURC1Q8WUH1 139 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 LPAR1Q92633 364 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 C6orf50Q9HD87 102 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 SNCAIPQ9Y6H5 919 aa16.93■□□□□ 0.3
CDK5RAP3-201ENST00000338399 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 NASPP49321 788 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 KLHL40Q2TBA0 621 aa16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
CDK5RAP3-201ENST00000338399 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 939.9 ms