RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 DMRT2Q9Y5R5 561 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 INHBAP08476 426 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 RINT1Q6NUQ1 792 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 TRIML1Q8N9V2 468 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 RHPN1Q8TCX5 695 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 SRGAP2BP0DMP2 458 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 CASP2P42575 452 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 ETF1P62495 437 aaKnown RBP6.74□□□□□ -1.33
CSMD1-201ENST00000335551 PDE4DQ08499 809 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 TMTC4Q5T4D3 741 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 ANKRD35Q8N283 1001 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 BZW2Q9Y6E2 419 aaKnown RBP6.74□□□□□ -1.33
CSMD1-201ENST00000335551 MAPK13O15264 365 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 EEF1GP26641 437 aaKnown RBP6.74□□□□□ -1.33
CSMD1-201ENST00000335551 EIF3BP55884 814 aaKnown RBP6.74□□□□□ -1.33
CSMD1-201ENST00000335551 TEDDM1Q5T9Z0 273 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 ZNF229Q9UJW7 825 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 SESN1Q9Y6P5 492 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 EFCAB14O75071 495 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 WBP4O75554 376 aaKnown RBP6.74□□□□□ -1.33
CSMD1-201ENST00000335551 DEXIO95424 95 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 DDX42Q86XP3 938 aaKnown RBP eCLIP6.74□□□□□ -1.33
CSMD1-201ENST00000335551 OR8K1Q8NGG5 319 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 STAMBPL1Q96FJ0 436 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 GPC4O75487 556 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 NR1H3Q13133 447 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 BSPRYQ5W0U4 402 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 TRMT10CQ7L0Y3 403 aaKnown RBP6.74□□□□□ -1.33
CSMD1-201ENST00000335551 RNF169Q8NCN4 708 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 CARD10Q9BWT7 1032 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 TRIM8Q9BZR9 551 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 CAPN11Q9UMQ6 739 aa6.74□□□□□ -1.33
CSMD1-201ENST00000335551 IFNB1P01574 187 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 PARP1P09874 1014 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 PROCA1Q8NCQ7 364 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 TMEM60Q9H2L4 133 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 KCNJ18B7U540 433 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 H3BRJ5 948 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 DEAF1O75398 565 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 MYCNP04198 464 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 XRCC5P13010 732 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 BLVRAP53004 296 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 KCNJ12Q14500 433 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 RRAGAQ7L523 313 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 TRIM50Q86XT4 487 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 TRIM59Q8IWR1 403 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ZMYM4Q5VZL5 1548 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 MYO1CO00159 1063 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ESRRBO95718 433 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 SERPINB2P05120 415 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 NR1D1P20393 614 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ECE1P42892 770 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 NSFP46459 744 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 SF3A3Q12874 501 aaKnown RBP eCLIP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 CUL1Q13616 776 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 TEX13AQ9BXU3 409 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 XPO4Q9C0E2 1151 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 LRRC37BQ96QE4 947 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 SLC24A3Q9HC58 644 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 DDX28Q9NUL7 540 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 RARS2Q5T160 578 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 FBXL13Q8NEE6 735 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 MKL2Q9ULH7 1088 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ZNF711Q9Y462 761 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 SOS1Q07889 1333 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 CCNT1O60563 726 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ST5P78524 1137 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 IL1RL1Q01638 556 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 GNPTABQ3T906 1256 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 GIPC2Q8TF65 315 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 LZTS2Q9BRK4 669 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 SEPT3Q9UH03 358 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 AP2B1P63010 937 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 CCDC15Q0P6D6 951 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ICA1LQ8NDH6 482 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 DACH2Q96NX9 599 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 NDE1Q9NXR1 346 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 RNF14Q9UBS8 474 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 NVLO15381 856 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 GUCY2DQ02846 1103 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 GLE1Q53GS7 698 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 AKNAD1Q5T1N1 836 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 USTQ9Y2C2 406 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 CCDC61Q9Y6R9 512 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 KIAA0586Q9BVV6 1533 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 KDM3AQ9Y4C1 1321 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 PRPF6O94906 941 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 IGHDP01880 384 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 CEP55Q53EZ4 464 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ZBTB41Q5SVQ8 909 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 LSM14BQ9BX40 385 aaKnown RBP6.73□□□□□ -1.33
CSMD1-201ENST00000335551 USP26Q9BXU7 913 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ATP6V0A4Q9HBG4 840 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 ARHGAP26Q9UNA1 814 aa6.73□□□□□ -1.33
CSMD1-201ENST00000335551 CFAP73A6NFT4 308 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 KCTD16Q68DU8 428 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 TEX11Q8IYF3 940 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 ENOX1Q8TC92 643 aaKnown RBP6.72□□□□□ -1.33
CSMD1-201ENST00000335551 SNX29Q8TEQ0 813 aa6.72□□□□□ -1.33
CSMD1-201ENST00000335551 CACTINQ8WUQ7 758 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms