RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PLA2G12BQ9BX93 195 aa18.23■□□□□ 0.51
UPK3B-202ENST00000334348 RNF26Q9BY78 433 aaPredicted RBP18.23■□□□□ 0.51
UPK3B-202ENST00000334348 BLZF1Q9H2G9 400 aa18.23■□□□□ 0.51
UPK3B-202ENST00000334348 TFR2Q9UP52 801 aa18.23■□□□□ 0.51
UPK3B-202ENST00000334348 RIPOR2Q9Y4F9 1068 aa18.23■□□□□ 0.51
UPK3B-202ENST00000334348 GTPBP6O43824 516 aaPredicted RBP18.22■□□□□ 0.51
UPK3B-202ENST00000334348 OPA1O60313 960 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 EPB41P11171 864 aaKnown RBP18.22■□□□□ 0.51
UPK3B-202ENST00000334348 KRT2P35908 639 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 MEA1Q16626 185 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 EARS2Q5JPH6 523 aaKnown RBP18.22■□□□□ 0.51
UPK3B-202ENST00000334348 KCNV1Q6PIU1 500 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 SHISA4Q96DD7 197 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 EHD4Q9H223 541 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 ATXN2Q99700 1313 aaKnown RBP18.22■□□□□ 0.51
UPK3B-202ENST00000334348 ERICH2A1L162 156 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 LGALS16A8MUM7 142 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 ZNF185O15231 689 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 PARP1P09874 1014 aaKnown RBP18.22■□□□□ 0.51
UPK3B-202ENST00000334348 SKOR1P84550 965 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 CNPY4Q8N129 248 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 GPATCH11Q8N954 259 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 STAG1Q8WVM7 1258 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
UPK3B-202ENST00000334348 PURBQ96QR8 312 aaKnown RBP18.22■□□□□ 0.51
UPK3B-202ENST00000334348 PYM1Q9BRP8 204 aaKnown RBP18.22■□□□□ 0.51
UPK3B-202ENST00000334348 RMND1Q9NWS8 449 aa18.22■□□□□ 0.51
UPK3B-202ENST00000334348 CHRM1P11229 460 aaPredicted RBP18.21■□□□□ 0.51
UPK3B-202ENST00000334348 CYLC1P35663 651 aaPredicted RBP18.21■□□□□ 0.51
UPK3B-202ENST00000334348 MNAT1P51948 309 aa18.21■□□□□ 0.51
UPK3B-202ENST00000334348 C2orf54Q08AI8 447 aa18.21■□□□□ 0.51
UPK3B-202ENST00000334348 FBXW10Q5XX13 1052 aa18.21■□□□□ 0.51
UPK3B-202ENST00000334348 PDXDC2PQ6P474 469 aa18.21■□□□□ 0.51
UPK3B-202ENST00000334348 SND1Q7KZF4 910 aaKnown RBP eCLIP18.21■□□□□ 0.51
UPK3B-202ENST00000334348 IRF2BP1Q8IU81 584 aa18.21■□□□□ 0.51
UPK3B-202ENST00000334348 ZNF507Q8TCN5 953 aa18.21■□□□□ 0.51
UPK3B-202ENST00000334348 ZKSCAN3Q9BRR0 538 aa18.21■□□□□ 0.51
UPK3B-202ENST00000334348 PHF20Q9BVI0 1012 aa18.21■□□□□ 0.51
UPK3B-202ENST00000334348 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.5
UPK3B-202ENST00000334348 MMP14P50281 582 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 ITIH3Q06033 890 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 ANKRD18AQ8IVF6 992 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 ZNF654Q8IZM8 581 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 MTRQ99707 1265 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 LACRTQ9GZZ8 138 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 VPS54Q9P1Q0 977 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 TCIRG1Q13488 830 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 ZNF572Q7Z3I7 529 aaPredicted RBP18.2■□□□□ 0.5
UPK3B-202ENST00000334348 CCDC170Q8IYT3 715 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 PRPF38AQ8NAV1 312 aaKnown RBP18.2■□□□□ 0.5
UPK3B-202ENST00000334348 NUP133Q8WUM0 1156 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
UPK3B-202ENST00000334348 RCCD1A6NED2 376 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 WNT7AO00755 349 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 PCCAP05165 728 aaPredicted RBP18.19■□□□□ 0.5
UPK3B-202ENST00000334348 IDEP14735 1019 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 ATP2C1P98194 919 aaPredicted RBP18.19■□□□□ 0.5
UPK3B-202ENST00000334348 PPP2R5BQ15173 497 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 RRP12Q5JTH9 1297 aaKnown RBP18.19■□□□□ 0.5
UPK3B-202ENST00000334348 ALS2CLQ60I27 953 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 B4GALNT4Q76KP1 1039 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 QTRT2Q9H974 415 aaKnown RBP18.19■□□□□ 0.5
UPK3B-202ENST00000334348 JADE2Q9NQC1 790 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 ARID4AP29374 1257 aaPredicted RBP18.19■□□□□ 0.5
UPK3B-202ENST00000334348 PRCPP42785 496 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 TRIM28Q13263 835 aaKnown RBP18.19■□□□□ 0.5
UPK3B-202ENST00000334348 ZNF174Q15697 407 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 PKN1Q16512 942 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 DISP2A7MBM2 1401 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 TIAM2Q8IVF5 1701 aa18.19■□□□□ 0.5
UPK3B-202ENST00000334348 PDS5AQ29RF7 1337 aaKnown RBP18.18■□□□□ 0.5
UPK3B-202ENST00000334348 GSG1L2A8MUP6 293 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 MBD4O95243 580 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 RPN1P04843 607 aaKnown RBP18.18■□□□□ 0.5
UPK3B-202ENST00000334348 EEF1GP26641 437 aaKnown RBP18.18■□□□□ 0.5
UPK3B-202ENST00000334348 LDHAL6AQ6ZMR3 332 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 SPATS2Q86XZ4 545 aaKnown RBP18.18■□□□□ 0.5
UPK3B-202ENST00000334348 CREG2Q8IUH2 290 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 CXorf56Q9H5V9 222 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 IPO7O95373 1038 aaKnown RBP18.18■□□□□ 0.5
UPK3B-202ENST00000334348 UQCRFS1P1P0C7P4 283 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 FAM98CQ17RN3 349 aaKnown RBP18.18■□□□□ 0.5
UPK3B-202ENST00000334348 TTC38Q5R3I4 469 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 TTLL11Q8NHH1 800 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 RRP36Q96EU6 259 aaKnown RBP18.18■□□□□ 0.5
UPK3B-202ENST00000334348 ZNHIT6Q9NWK9 470 aaKnown RBP18.18■□□□□ 0.5
UPK3B-202ENST00000334348 SNX12Q9UMY4 172 aa18.18■□□□□ 0.5
UPK3B-202ENST00000334348 SPATA31A1Q5TZJ5 1347 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 MAP2K2P36507 400 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 PTGDRQ13258 359 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 FAM89AQ96GI7 184 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 LRRC1Q9BTT6 524 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 RABEP2Q9H5N1 569 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 NHEJ1Q9H9Q4 299 aaPredicted RBP18.17■□□□□ 0.5
UPK3B-202ENST00000334348 GDAQ9Y2T3 454 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 PRLRP16471 622 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 FNTAP49354 379 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 EPHB4P54760 987 aa18.17■□□□□ 0.5
UPK3B-202ENST00000334348 EMBQ6PCB8 327 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms