RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 STRBPQ96SI9 672 aaKnown RBP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 CHP1Q99653 195 aa18.21■□□□□ 0.51
CCDC8-201ENST00000307522 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 AATFQ9NY61 560 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCDC8-201ENST00000307522 LAMB4A4D0S4 1761 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 FGFR2P21802 821 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 NCOA7Q8NI08 942 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
CCDC8-201ENST00000307522 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 KIAA0754O94854 1291 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 SATB1Q01826 763 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 IFNL3Q8IZI9 196 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 RNF217Q8TC41 542 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 VPS16Q9H269 839 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 COL14A1Q05707 1796 aaKnown RBP18.2■□□□□ 0.5
CCDC8-201ENST00000307522 NUP188Q5SRE5 1749 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 MROH5Q6ZUA9 1318 aa18.2■□□□□ 0.5
CCDC8-201ENST00000307522 ZC3H4Q9UPT8 1303 aaKnown RBP18.2■□□□□ 0.5
CCDC8-201ENST00000307522 CDC25CP30307 473 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 SEC24CP53992 1094 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 PPP1R12BO60237 982 aaPredicted RBP18.19■□□□□ 0.5
CCDC8-201ENST00000307522 ELF1P32519 619 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 SLC39A14Q15043 492 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 PARP10Q53GL7 1025 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 SGSM3Q96HU1 749 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 NUP88Q99567 741 aaPredicted RBP18.19■□□□□ 0.5
CCDC8-201ENST00000307522 LTBP4Q8N2S1 1624 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 ABCC6O95255 1503 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
CCDC8-201ENST00000307522 NF2P35240 595 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 RPS8P62241 208 aaKnown RBP18.19■□□□□ 0.5
CCDC8-201ENST00000307522 GUCY1A3Q02108 690 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 ZSWIM5Q9P217 1185 aa18.19■□□□□ 0.5
CCDC8-201ENST00000307522 GRIN2DO15399 1336 aa18.18■□□□□ 0.5
CCDC8-201ENST00000307522 TMEM67Q5HYA8 995 aa18.18■□□□□ 0.5
CCDC8-201ENST00000307522 ODF2LQ9ULJ1 636 aa18.18■□□□□ 0.5
CCDC8-201ENST00000307522 MAPK8IP1Q9UQF2 711 aa18.18■□□□□ 0.5
CCDC8-201ENST00000307522 MYO5AQ9Y4I1 1855 aaKnown RBP18.18■□□□□ 0.5
CCDC8-201ENST00000307522 NMT2O60551 498 aa18.18■□□□□ 0.5
CCDC8-201ENST00000307522 FAM43BQ6ZT52 329 aaPredicted RBP18.18■□□□□ 0.5
CCDC8-201ENST00000307522 EHD2Q9NZN4 543 aa18.18■□□□□ 0.5
CCDC8-201ENST00000307522 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.18■□□□□ 0.5
CCDC8-201ENST00000307522 RANBP6O60518 1105 aaKnown RBP18.17■□□□□ 0.5
CCDC8-201ENST00000307522 GYPCP04921 128 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 CYP2D6P10635 497 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 USP8P40818 1118 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 DNA2P51530 1060 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 USP14P54578 494 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 NR1I3Q14994 352 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 ALG1Q9BT22 464 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 EIF4E1BA6NMX2 242 aaKnown RBP18.17■□□□□ 0.5
CCDC8-201ENST00000307522 F8W031 263 aaPredicted RBP18.17■□□□□ 0.5
CCDC8-201ENST00000307522 EIF3HO15372 352 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCDC8-201ENST00000307522 ZFYP08048 801 aaPredicted RBP18.17■□□□□ 0.5
CCDC8-201ENST00000307522 PEX19P40855 299 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 DIXDC1Q155Q3 683 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 GRIK5Q16478 980 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 ATL3Q6DD88 541 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 FAM84BQ96KN1 310 aaPredicted RBP18.17■□□□□ 0.5
CCDC8-201ENST00000307522 GSG1L2A8MUP6 293 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 PDE2AO00408 941 aaPredicted RBP18.17■□□□□ 0.5
CCDC8-201ENST00000307522 KRT14P02533 472 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 ARHGAP25P42331 645 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 IFT88Q13099 833 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 POSTNQ15063 836 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 NUP98P52948 1817 aa18.17■□□□□ 0.5
CCDC8-201ENST00000307522 TCRBV5S4A2TA0A5A2 114 aa18.16■□□□□ 0.5
CCDC8-201ENST00000307522 UQCRFS1P1P0C7P4 283 aa18.16■□□□□ 0.5
CCDC8-201ENST00000307522 ZNF18P17022 549 aa18.16■□□□□ 0.5
CCDC8-201ENST00000307522 FAM47AQ5JRC9 791 aa18.16■□□□□ 0.5
CCDC8-201ENST00000307522 TMED8Q6PL24 325 aaPredicted RBP18.16■□□□□ 0.5
CCDC8-201ENST00000307522 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
CCDC8-201ENST00000307522 MIEF2Q96C03 454 aa18.16■□□□□ 0.5
CCDC8-201ENST00000307522 HPS5Q9UPZ3 1129 aa18.16■□□□□ 0.5
CCDC8-201ENST00000307522 DUSP10Q9Y6W6 482 aa18.16■□□□□ 0.5
CCDC8-201ENST00000307522 MYH8P13535 1937 aa18.16■□□□□ 0.5
CCDC8-201ENST00000307522 RIMBP2O15034 1052 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 MFAP3LO75121 409 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 CD44P16070 742 aaKnown RBP18.15■□□□□ 0.5
CCDC8-201ENST00000307522 WHAMMP3Q1A5X7 153 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 TPTE2Q6XPS3 522 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCDC8-201ENST00000307522 ARID4AP29374 1257 aaPredicted RBP18.15■□□□□ 0.5
CCDC8-201ENST00000307522 CXCR5P32302 372 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 TTF1Q15361 905 aaPredicted RBP18.15■□□□□ 0.5
CCDC8-201ENST00000307522 CAVIN4Q5BKX8 364 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 JADE2Q9NQC1 790 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 MACROD2A1Z1Q3 448 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 LRP6O75581 1613 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 GUCY1A2P33402 732 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 KRT40Q6A162 431 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 SLC26A6Q9BXS9 759 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 VEZTQ9HBM0 779 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 TAB2Q9NYJ8 693 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 KCNJ14Q9UNX9 436 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 HPSEQ9Y251 543 aa18.15■□□□□ 0.5
CCDC8-201ENST00000307522 KIF1CO43896 1103 aaKnown RBP18.14■□□□□ 0.49
CCDC8-201ENST00000307522 AARSP49588 968 aaKnown RBP eCLIP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms