RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.12■□□□□ 0.49
BRD3-201ENST00000303407 GOLGA6AQ9NYA3 693 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 AGTPBP1Q9UPW5 1226 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 SAR1BQ9Y6B6 198 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 COMMD10Q9Y6G5 202 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 LMTK2Q8IWU2 1503 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 BCRP11274 1271 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 PPP1R13BQ96KQ4 1090 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 SLC39A2Q9NP94 309 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 OAS2P29728 719 aaKnown RBP18.12■□□□□ 0.49
BRD3-201ENST00000303407 RPS6KA1Q15418 735 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 CERKLQ49MI3 558 aaPredicted RBP18.12■□□□□ 0.49
BRD3-201ENST00000303407 TRIM31Q9BZY9 425 aa18.12■□□□□ 0.49
BRD3-201ENST00000303407 SOS2Q07890 1332 aaPredicted RBP18.11■□□□□ 0.49
BRD3-201ENST00000303407 STX10O60499 249 aa18.11■□□□□ 0.49
BRD3-201ENST00000303407 ECM2O94769 699 aaPredicted RBP18.11■□□□□ 0.49
BRD3-201ENST00000303407 ATP2A2P16615 1042 aaKnown RBP18.11■□□□□ 0.49
BRD3-201ENST00000303407 ZNF354CQ86Y25 554 aa18.11■□□□□ 0.49
BRD3-201ENST00000303407 CCDC63Q8NA47 563 aa18.11■□□□□ 0.49
BRD3-201ENST00000303407 ACTN4O43707 911 aaKnown RBP18.11■□□□□ 0.49
BRD3-201ENST00000303407 NSMFQ6X4W1 530 aa18.11■□□□□ 0.49
BRD3-201ENST00000303407 SAMD15Q9P1V8 674 aa18.11■□□□□ 0.49
BRD3-201ENST00000303407 GOLGA6BA6NDN3 693 aa18.11■□□□□ 0.49
BRD3-201ENST00000303407 TOB2Q14106 344 aaPredicted RBP18.11■□□□□ 0.49
BRD3-201ENST00000303407 LEMD3Q9Y2U8 911 aa18.11■□□□□ 0.49
BRD3-201ENST00000303407 PCDHB13Q9Y5F0 798 aa18.11■□□□□ 0.49
BRD3-201ENST00000303407 NIM1KQ8IY84 436 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 ZSWIM5Q9P217 1185 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 CYP27B1O15528 508 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 COPB1P53618 953 aaKnown RBP18.1■□□□□ 0.49
BRD3-201ENST00000303407 TRPC3Q13507 836 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 ARHGAP44Q17R89 818 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 FNBP4Q8N3X1 1017 aaPredicted RBP18.1■□□□□ 0.49
BRD3-201ENST00000303407 GOLGA8FQ08AF8 430 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 GOLGA8DPQ0D2H9 430 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 ERCC6LQ2NKX8 1250 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 MIER3Q7Z3K6 550 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 PEX26Q7Z412 305 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 LRRC45Q96CN5 670 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 MAN1B1Q9UKM7 699 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 MXRA7P84157 204 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 RASGRP4Q8TDF6 673 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 CHURC1Q8WUH1 139 aa18.1■□□□□ 0.49
BRD3-201ENST00000303407 IKBKBO14920 756 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
BRD3-201ENST00000303407 TRAPPC10P48553 1259 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 MCTP2Q6DN12 878 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 GRAMD1CQ8IYS0 662 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 TMEM87AQ8NBN3 555 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 SLFNL1Q499Z3 407 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 KIAA0825Q8IV33 1275 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 AXIN2Q9Y2T1 843 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 PPEF1O14829 653 aaPredicted RBP18.09■□□□□ 0.49
BRD3-201ENST00000303407 CYP2J2P51589 502 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 PAK2Q13177 524 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 DAAM2Q86T65 1068 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 RDH13Q8NBN7 331 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 TRIM58Q8NG06 486 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 TTLL11Q8NHH1 800 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 FBF1Q8TES7 1133 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 VTI1AQ96AJ9 217 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 PSDA5PKW4 1024 aaPredicted RBP18.09■□□□□ 0.49
BRD3-201ENST00000303407 MCAMP43121 646 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 GABPB1Q06547 395 aaPredicted RBP18.09■□□□□ 0.49
BRD3-201ENST00000303407 RASGRF1Q13972 1273 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 GSDMAQ96QA5 445 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 ZNF215Q9UL58 517 aaPredicted RBP18.09■□□□□ 0.49
BRD3-201ENST00000303407 TCP10L2B9ZVM9 353 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 LAD1O00515 517 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 SUSD4Q5VX71 490 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 FBXO11Q86XK2 927 aa18.09■□□□□ 0.49
BRD3-201ENST00000303407 ATP5DP30049 168 aa18.08■□□□□ 0.49
BRD3-201ENST00000303407 ICA1Q05084 483 aa18.08■□□□□ 0.49
BRD3-201ENST00000303407 NR5A1Q13285 461 aa18.08■□□□□ 0.49
BRD3-201ENST00000303407 FAM170AA1A519 330 aa18.08■□□□□ 0.49
BRD3-201ENST00000303407 U2AF1L4Q8WU68 220 aaKnown RBP18.08■□□□□ 0.49
BRD3-201ENST00000303407 MYO1AQ9UBC5 1043 aa18.08■□□□□ 0.49
BRD3-201ENST00000303407 FERP16591 822 aa18.08■□□□□ 0.48
BRD3-201ENST00000303407 ETF1P62495 437 aaKnown RBP18.08■□□□□ 0.48
BRD3-201ENST00000303407 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.48
BRD3-201ENST00000303407 MAGEF1Q9HAY2 307 aa18.08■□□□□ 0.48
BRD3-201ENST00000303407 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.48
BRD3-201ENST00000303407 POLR2MP0CAP2 368 aa18.08■□□□□ 0.48
BRD3-201ENST00000303407 SMYD4Q8IYR2 804 aaPredicted RBP18.08■□□□□ 0.48
BRD3-201ENST00000303407 ERCC5P28715 1186 aaPredicted RBP18.07■□□□□ 0.48
BRD3-201ENST00000303407 CASP14P31944 242 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 PTPN21Q16825 1174 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 EFCAB8A8MWE9 144 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 NOP56O00567 594 aaKnown RBP18.07■□□□□ 0.48
BRD3-201ENST00000303407 BRD3Q15059 726 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 HLFQ16534 295 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 APBB1IPQ7Z5R6 666 aaPredicted RBP18.07■□□□□ 0.48
BRD3-201ENST00000303407 SLFN13Q68D06 897 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 RPGRIP1Q96KN7 1286 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 AIFM3Q96NN9 605 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 PLEKHA4Q9H4M7 779 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.07■□□□□ 0.484e-6■■■■□ 20.1
BRD3-201ENST00000303407 ZBTB16Q05516 673 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 HOOK2Q96ED9 719 aa18.07■□□□□ 0.48
BRD3-201ENST00000303407 BUB1O43683 1085 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms