RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Trappc12Q8K2L8 797 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 FktnQ8R507 461 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Vps16Q920Q4 839 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Mtmr9Q9Z2D0 545 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Armc3A2AU72 881 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Gm21969J3QJZ1 289 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Copb2O55029 905 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Lrch1P62046 709 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Cfap157Q0VFX2 523 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Eme2Q56A04 373 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Hdac4Q6NZM9 1076 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Usp49Q6P9L4 685 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 PigsQ6PD26 555 aaKnown RBP17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Ube2oQ6ZPJ3 1288 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Galntl5Q9D4M9 431 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Tmem191cQ9JJB1 302 aa17.78■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Dhx8A2A4P0 1244 aaKnown RBP17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Nova2D3YVV7 556 aaKnown RBP17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Atp2b1G5E829 1220 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Rasa2P58069 847 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Cnga2Q62398 664 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Ctdspl2Q8BG15 465 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Vgll2Q8BGW8 322 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Gjd4Q8BSD4 364 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Plcg2Q8CIH5 1265 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Lman1lQ8VCD3 505 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Ppp2r5dQ91V89 594 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Scrn1Q9CZC8 414 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Polr2dQ9D7M8 142 aaKnown RBP17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Prkab1Q9R078 270 aa17.77■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Dock2Q8C3J5 1828 aa17.77■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Gm10134F6ZQC6 126 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 En2P09066 324 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Vmn1r209Q5NC97 312 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Tmprss11eQ5S248 423 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Psen2Q61144 448 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Cep120Q7TSG1 988 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Kctd10Q922M3 315 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Nedd1P33215 660 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Bace1P56818 501 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Psg29Q3URN6 468 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Oog3Q3UWY1 500 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Pex1Q5BL07 1284 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Ptger2Q62053 362 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Stxbp2Q64324 593 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Sez6lQ6P1D5 963 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Ccdc172Q810N9 267 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Znf428Q8C1M2 176 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Golph3lQ8R088 285 aaKnown RBP17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Wdr64Q9D565 1086 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Ifi202Q9R002 445 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Cry2Q9R194 592 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Large1Q9Z1M7 756 aa17.76■□□□□ 0.43
Ubp1-206ENSMUST00000216558 XdhQ00519 1335 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 CfhP06909 1234 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 OatP29758 439 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Irf6P97431 467 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Slc7a1Q09143 622 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 ArsiQ32KI9 573 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Gpcpd1Q8C0L9 675 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 MslnlQ8C160 685 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Phf20l1Q8CCJ9 1013 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Calhm4Q8CE93 315 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Depdc1aQ8CIG0 804 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Mmtag2Q99LX5 260 aaKnown RBP17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 LpxnQ99N69 386 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Cul5Q9D5V5 780 aa17.75■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Gm5134E9QAB5 671 aa17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Nr5a1P33242 462 aa17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Bach1P97302 739 aa17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Pspc1Q8R326 523 aaKnown RBP17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Ascc2Q91WR3 749 aa17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Rnaseh2aQ9CWY8 301 aa17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Hmgn5Q9JL35 406 aa17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Trim44Q9QXA7 346 aa17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Vnn1Q9Z0K8 512 aa17.74■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Gm7356A0A087WSA6 508 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Palm3A2TJV2 734 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Adcy5P84309 1262 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Oxr1Q4KMM3 866 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Q8BZJ8 459 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Shtn1Q8K2Q9 631 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Oxnad1Q8VE38 311 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 MbipQ99LQ1 341 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Slc5a5Q99PN0 618 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Ankrd1Q9CR42 319 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Arl6ip4Q9JM93 229 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Ulk4Q3V129 1303 aa17.73■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Cyp2e1Q05421 493 aa17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Dhx40Q6PE54 779 aaKnown RBP17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 BC048507Q80ZS7 89 aa17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Ehd2Q8BH64 543 aa17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Tsen34Q8BMZ5 316 aa17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Sox30Q8CGW4 782 aa17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 MyripQ8K3I4 856 aa17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Dppa3Q8QZY3 150 aa17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Luzp1Q8R4U7 1068 aaKnown RBP17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Kri1Q8VDQ9 704 aaKnown RBP17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Mrpl11Q9CQF0 192 aaKnown RBP17.72■□□□□ 0.43
Ubp1-206ENSMUST00000216558 Arpp21Q9DCB4 807 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 86.8 ms