RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	ORC3	P54790	616 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	SNP1	Q00916	300 aa	Predicted RBP	2.46	□□□□□ -2.01
VTC3	YPL019C	EBS1	Q03466	884 aa	Known RBP	2.46	□□□□□ -2.01
VTC3	YPL019C	YML096W	Q04489	525 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	CIR2	Q08822	631 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	YOR378W	Q08902	515 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	AFT2	Q08957	416 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	SRO7	Q12038	1033 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.46	□□□□□ -2.01	not detected
VTC3	YPL019C	SUL2	Q12325	893 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	SFI1	Q12369	946 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	PEX11	Q12462	236 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	VPS5	Q92331	675 aa		2.46	□□□□□ -2.01
VTC3	YPL019C	CDC37	P06101	506 aa	Known RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	RIP1	P08067	215 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	MTF2	P10849	440 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	PUT4	P15380	627 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	MET16	P18408	261 aa	Predicted RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	DAL82	P21705	255 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	PMT1	P33775	817 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	STO1	P34160	861 aa	Known RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	FUI1	P38196	639 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	KAP104	P38217	918 aa	Known RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	UBS1	P38290	277 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	FSH1	P38777	243 aa	Known RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	YER130C	P39959	443 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	EDC3	P39998	551 aa	Known RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	CCT5	P40413	562 aa	Known RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	UBC9	P50623	157 aa	Predicted RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	PUS2	P53167	370 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	DAM1	P53267	343 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	SNO2	P53823	222 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	PIR1	Q03178	341 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	SND1	Q04007	877 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	SSL1	Q04673	461 aa	Predicted RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	GRX8	Q05926	109 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	AIM39	Q08223	395 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	ETT1	Q08421	412 aa	Known RBP	2.46	□□□□□ -2.02
VTC3	YPL019C	YOR389W	Q08912	624 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	YPL278C	Q08990	100 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	YLR122C	Q12312	125 aa		2.46	□□□□□ -2.02
VTC3	YPL019C	MPH2	P0CD99	609 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	SST2	P11972	698 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	SEC1	P30619	724 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	GYP6	P32806	458 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	HXT6	P39003	570 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	HXT7	P39004	570 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	ELO1	P39540	310 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	OAF1	P39720	1047 aa	Predicted RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	YIL108W	P40483	696 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	HYR1	P40581	163 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	SNZ3	P43545	298 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	AMA1	P50082	593 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	HST1	P53685	503 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	SNZ2	P53824	298 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	ECM9	Q02202	377 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	YMR178W	Q03219	274 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	SSY1	Q03770	852 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	ARA2	Q04212	335 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	RPC11	Q04307	110 aa	Predicted RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	VMS1	Q04311	632 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	GFD1	Q04839	188 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	CDA1	Q06702	301 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	NBA1	Q08229	501 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	FAP7	Q12055	197 aa	Predicted RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	YDR061W	Q12298	539 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	GPR1	Q12361	961 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	Q0142	Q9ZZW4	58 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	MEC1	P38111	2368 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	GPA1	P08539	472 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	RPS21A	P0C0V8	87 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	YKR104W	P0CE69	306 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	YPK1	P12688	680 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	MRPL8	P22353	238 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	MNE1	P24720	663 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	ADY2	P25613	283 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	NIP100	P33420	868 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	ADE17	P38009	592 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	TAE1	P38340	232 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	PTC7	P38797	343 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	CKB2	P38930	258 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	PTI1	P39927	425 aa	Predicted RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	GPP2	P40106	250 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	RAD26	P40352	1085 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	SNG1	P46950	547 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	CIS3	P47001	227 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	GLG2	P47011	380 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	EMC4	P53073	190 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	ARP4	P80428	489 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	PPN1	Q04119	674 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	SXM1	Q04175	944 aa	Known RBP	2.45	□□□□□ -2.02
VTC3	YPL019C	YPR114W	Q06107	315 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	GUP2	Q08929	609 aa		2.45	□□□□□ -2.02
VTC3	YPL019C	UBR1	P19812	1950 aa		2.44	□□□□□ -2.02
VTC3	YPL019C	ABF1	P14164	731 aa		2.44	□□□□□ -2.02
VTC3	YPL019C	PTP1	P25044	335 aa		2.44	□□□□□ -2.02
VTC3	YPL019C	SNT1	P25357	1226 aa		2.44	□□□□□ -2.02
VTC3	YPL019C	CIN8	P27895	1000 aa		2.44	□□□□□ -2.02
VTC3	YPL019C	CWP1	P28319	239 aa		2.44	□□□□□ -2.02
VTC3	YPL019C	PRP19	P32523	503 aa	Known RBP	2.44	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 245.3 ms