RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W CST6P40535 587 aa3.73□□□□□ -1.81
SWI1YPL016W DUG1P43616 481 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W TAX4P47030 604 aa3.73□□□□□ -1.81
SWI1YPL016W YJL016WP47072 561 aa3.73□□□□□ -1.81
SWI1YPL016W ZIP2P53061 704 aa3.73□□□□□ -1.81
SWI1YPL016W SIW14P53965 281 aa3.73□□□□□ -1.81
SWI1YPL016W STP1Q00947 519 aa3.73□□□□□ -1.81
SWI1YPL016W SWA2Q06677 668 aa3.73□□□□□ -1.81
SWI1YPL016W UBX5Q06682 500 aa3.73□□□□□ -1.81
SWI1YPL016W PUS7Q08647 676 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W YPL191CQ08930 360 aa3.73□□□□□ -1.81
SWI1YPL016W YPL119C-AQ3E751 87 aa3.73□□□□□ -1.81
SWI1YPL016W SEY1Q99287 776 aa3.73□□□□□ -1.81
SWI1YPL016W HIS4P00815 799 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W IPP1P00817 287 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W APA2P22108 325 aa3.73□□□□□ -1.81
SWI1YPL016W RET1P22276 1149 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W SMI1P32566 505 aa3.73□□□□□ -1.81
SWI1YPL016W UGP1P32861 499 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W VPS29P38759 282 aa3.73□□□□□ -1.81
SWI1YPL016W NPP2P39997 493 aa3.73□□□□□ -1.81
SWI1YPL016W LCP5P40079 357 aaPredicted RBP3.73□□□□□ -1.81
SWI1YPL016W SIP5P40210 489 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W CHS6P40955 746 aa3.73□□□□□ -1.81
SWI1YPL016W CTR1P49573 406 aa3.73□□□□□ -1.81
SWI1YPL016W HSH155P49955 971 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W IMA1P53051 589 aa3.73□□□□□ -1.81
SWI1YPL016W LSG1P53145 640 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W BNA7Q04066 261 aa3.73□□□□□ -1.81
SWI1YPL016W YDR387CQ04162 555 aa3.73□□□□□ -1.81
SWI1YPL016W YMR018WQ04364 514 aa3.73□□□□□ -1.81
SWI1YPL016W YDR286CQ05530 114 aa3.73□□□□□ -1.81
SWI1YPL016W LOT6Q07923 191 aa3.73□□□□□ -1.81
SWI1YPL016W SKI7Q08491 747 aaPredicted RBP3.73□□□□□ -1.81
SWI1YPL016W YRR1Q12172 810 aa3.73□□□□□ -1.81
SWI1YPL016W LCB4Q12246 624 aa3.73□□□□□ -1.81
SWI1YPL016W SNU23Q12368 194 aaPredicted RBP3.73□□□□□ -1.81
SWI1YPL016W ATR1P13090 542 aa3.73□□□□□ -1.81
SWI1YPL016W DAL1P32375 460 aa3.73□□□□□ -1.81
SWI1YPL016W APE2P32454 952 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W MSN4P33749 630 aa3.73□□□□□ -1.81
SWI1YPL016W POA1P38218 177 aa3.73□□□□□ -1.81
SWI1YPL016W YHK8P38776 514 aa3.73□□□□□ -1.81
SWI1YPL016W GUS1P46655 708 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
SWI1YPL016W MAD3P47074 515 aa3.73□□□□□ -1.81
SWI1YPL016W BIO3P50277 480 aa3.73□□□□□ -1.81
SWI1YPL016W PIP2P52960 996 aa3.73□□□□□ -1.81
SWI1YPL016W NUT1P53114 1132 aa3.73□□□□□ -1.81
SWI1YPL016W APP1P53933 587 aa3.73□□□□□ -1.81
SWI1YPL016W MTQ1P53944 314 aa3.73□□□□□ -1.81
SWI1YPL016W MTG1Q03151 367 aaPredicted RBP3.73□□□□□ -1.81
SWI1YPL016W TIF35Q04067 274 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W PLM2Q04383 521 aa3.73□□□□□ -1.81
SWI1YPL016W PAA1Q12447 191 aaKnown RBP3.73□□□□□ -1.81
SWI1YPL016W CLN2P20438 545 aa3.72□□□□□ -1.81
SWI1YPL016W PRP5P21372 849 aaPredicted RBP3.72□□□□□ -1.81
SWI1YPL016W VMA4P22203 233 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W CHS3P29465 1165 aa3.72□□□□□ -1.81
SWI1YPL016W YKT6P36015 200 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W YBR238CP38330 731 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W YGR012WP53206 393 aa3.72□□□□□ -1.81
SWI1YPL016W YMR279CQ03263 540 aa3.72□□□□□ -1.81
SWI1YPL016W CDC73Q06697 393 aa3.72□□□□□ -1.81
SWI1YPL016W SUB2Q07478 446 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W YLR031WQ07978 186 aa3.72□□□□□ -1.81
SWI1YPL016W GSH2Q08220 491 aa3.72□□□□□ -1.81
SWI1YPL016W TRE2Q08693 809 aa3.72□□□□□ -1.81
SWI1YPL016W SPO21Q12411 609 aa3.72□□□□□ -1.81
SWI1YPL016W YGL194C-AQ2V2P6 80 aa3.72□□□□□ -1.81
SWI1YPL016W APN1P22936 367 aa3.72□□□□□ -1.81
SWI1YPL016W MSN2P33748 704 aa3.72□□□□□ -1.81
SWI1YPL016W GLG1P36143 616 aa3.72□□□□□ -1.81
SWI1YPL016W SUL1P38359 859 aa3.72□□□□□ -1.81
SWI1YPL016W KSP1P38691 1029 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W IMD2P38697 523 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W STT3P39007 718 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W STL1P39932 569 aa3.72□□□□□ -1.81
SWI1YPL016W HAT2P39984 401 aa3.72□□□□□ -1.81
SWI1YPL016W ALD5P40047 520 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W SLX8P40072 274 aa3.72□□□□□ -1.81
SWI1YPL016W TFG2P41896 400 aaPredicted RBP3.72□□□□□ -1.81
SWI1YPL016W GFD1Q04839 188 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W PSR2Q07949 397 aa3.72□□□□□ -1.81
SWI1YPL016W FAL1Q12099 399 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W ENT1Q12518 454 aa3.72□□□□□ -1.81
SWI1YPL016W MAK16P10962 306 aaPredicted RBP3.72□□□□□ -1.81
SWI1YPL016W CMK2P22517 447 aa3.72□□□□□ -1.81
SWI1YPL016W AMS1P22855 1083 aa3.72□□□□□ -1.81
SWI1YPL016W PWP2P25635 923 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W CRM1P30822 1084 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W ASF1P32447 279 aa3.72□□□□□ -1.81
SWI1YPL016W ASF2P32448 525 aaPredicted RBP3.72□□□□□ -1.81
SWI1YPL016W PET309P32522 965 aaPredicted RBP3.72□□□□□ -1.81
SWI1YPL016W YBL010CP32788 280 aa3.72□□□□□ -1.81
SWI1YPL016W LIP5P32875 414 aa3.72□□□□□ -1.81
SWI1YPL016W DHR2P36009 735 aaPredicted RBP3.72□□□□□ -1.81
SWI1YPL016W YJL206CP39529 758 aa3.72□□□□□ -1.81
SWI1YPL016W FMP52P40008 231 aa3.72□□□□□ -1.81
SWI1YPL016W ARH1P48360 493 aa3.72□□□□□ -1.81
SWI1YPL016W PRO2P54885 456 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms