RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C SNF12P53628 566 aa9.46□□□□□ -0.9
SPT20YOL148C GPD1Q00055 391 aaKnown RBP9.46□□□□□ -0.9
SPT20YOL148C YMR155WQ03795 547 aa9.46□□□□□ -0.9
SPT20YOL148C YLL032CQ07834 825 aaKnown RBP RIP-Chip data9.46□□□□□ -0.9not detected
SPT20YOL148C YBR298C-AQ8TGK4 73 aa9.46□□□□□ -0.9
SPT20YOL148C GID7P25569 745 aa9.45□□□□□ -0.9
SPT20YOL148C RPS7AP26786 190 aaKnown RBP9.45□□□□□ -0.9
SPT20YOL148C ASF2P32448 525 aaPredicted RBP9.45□□□□□ -0.9
SPT20YOL148C MNN2P38069 597 aa9.45□□□□□ -0.9
SPT20YOL148C KTR4P38131 464 aa9.45□□□□□ -0.9
SPT20YOL148C YJL181WP46987 611 aa9.45□□□□□ -0.9
SPT20YOL148C IMA1P53051 589 aa9.45□□□□□ -0.9
SPT20YOL148C YPR003CP53394 754 aa9.45□□□□□ -0.9
SPT20YOL148C SVL3Q03088 825 aaKnown RBP9.45□□□□□ -0.9
SPT20YOL148C PEX12Q04370 399 aa9.45□□□□□ -0.9
SPT20YOL148C VPS36Q06696 566 aa9.45□□□□□ -0.9
SPT20YOL148C CRD1Q07560 283 aa9.45□□□□□ -0.9
SPT20YOL148C YRR1Q12172 810 aa9.45□□□□□ -0.9
SPT20YOL148C ATG34Q12292 412 aa9.45□□□□□ -0.9
SPT20YOL148C COX4P04037 155 aa9.45□□□□□ -0.9
SPT20YOL148C GPH1P06738 902 aaKnown RBP9.45□□□□□ -0.9
SPT20YOL148C ERR1P0CX10 437 aa9.45□□□□□ -0.9
SPT20YOL148C ERR2P0CX11 437 aa9.45□□□□□ -0.9
SPT20YOL148C RED1P14291 827 aa9.45□□□□□ -0.9
SPT20YOL148C SAR1P20606 190 aaKnown RBP9.45□□□□□ -0.9
SPT20YOL148C TOS1P38288 455 aa9.45□□□□□ -0.9
SPT20YOL148C YHI9P38765 294 aa9.45□□□□□ -0.9
SPT20YOL148C MTW1P39731 289 aa9.45□□□□□ -0.9
SPT20YOL148C ERR3P42222 437 aa9.45□□□□□ -0.9
SPT20YOL148C CCT8P47079 568 aaKnown RBP9.45□□□□□ -0.9
SPT20YOL148C MDE1P47095 244 aa9.45□□□□□ -0.9
SPT20YOL148C DIA3P52290 468 aa9.45□□□□□ -0.9
SPT20YOL148C YPL107WQ02873 248 aa9.45□□□□□ -0.9
SPT20YOL148C CFT2Q12102 859 aaPredicted RBP9.45□□□□□ -0.9
SPT20YOL148C ATG31Q12421 196 aa9.45□□□□□ -0.9
SPT20YOL148C KIN1P13185 1064 aa9.44□□□□□ -0.9
SPT20YOL148C SWD1P39706 426 aa9.44□□□□□ -0.9
SPT20YOL148C RBG1P39729 369 aa9.44□□□□□ -0.9
SPT20YOL148C AVT1P47082 602 aa9.44□□□□□ -0.9
SPT20YOL148C LIF1P53150 421 aa9.44□□□□□ -0.9
SPT20YOL148C BUD32P53323 261 aa9.44□□□□□ -0.9
SPT20YOL148C YDR090CQ03193 310 aa9.44□□□□□ -0.9
SPT20YOL148C DOT1Q04089 582 aaKnown RBP9.44□□□□□ -0.9
SPT20YOL148C MRX10Q05648 414 aa9.44□□□□□ -0.9
SPT20YOL148C CDC123Q05791 360 aa9.44□□□□□ -0.9
SPT20YOL148C HDA3Q06623 655 aa9.44□□□□□ -0.9
SPT20YOL148C AIM39Q08223 395 aa9.44□□□□□ -0.9
SPT20YOL148C SMF3Q12078 473 aaPredicted RBP9.44□□□□□ -0.9
SPT20YOL148C YDL109CQ12103 647 aa9.44□□□□□ -0.9
SPT20YOL148C FMP16Q12497 93 aa9.44□□□□□ -0.9
SPT20YOL148C LSO2Q3E772 92 aaKnown RBP9.44□□□□□ -0.9
SPT20YOL148C NSP1P14907 823 aaKnown RBP9.43□□□□□ -0.9
SPT20YOL148C PUT4P15380 627 aa9.43□□□□□ -0.9
SPT20YOL148C GIT1P25346 518 aa9.43□□□□□ -0.9
SPT20YOL148C LRG1P35688 1017 aa9.43□□□□□ -0.9
SPT20YOL148C FMP23P38231 175 aa9.43□□□□□ -0.9
SPT20YOL148C ECM8P38246 354 aa9.43□□□□□ -0.9
SPT20YOL148C GPB2P39717 880 aa9.43□□□□□ -0.9
SPT20YOL148C MND2P40577 368 aa9.43□□□□□ -0.9
SPT20YOL148C DID2P69771 204 aa9.43□□□□□ -0.9
SPT20YOL148C APC4Q04601 652 aa9.43□□□□□ -0.9
SPT20YOL148C RSC2Q06488 889 aa9.43□□□□□ -0.9
SPT20YOL148C GTT2Q12390 233 aa9.43□□□□□ -0.9
SPT20YOL148C TRM10Q12400 293 aa9.43□□□□□ -0.9
SPT20YOL148C YOL159C-AQ3E769 90 aa9.43□□□□□ -0.9
SPT20YOL148C COX6P00427 148 aa9.42□□□□□ -0.9
SPT20YOL148C YKU70P32807 602 aa9.42□□□□□ -0.9
SPT20YOL148C BEM3P32873 1128 aa9.42□□□□□ -0.9
SPT20YOL148C ASK1P35734 292 aa9.42□□□□□ -0.9
SPT20YOL148C TFA2P36145 328 aa9.42□□□□□ -0.9
SPT20YOL148C YBL029WP38201 376 aa9.42□□□□□ -0.9
SPT20YOL148C YBL028CP38202 106 aa9.42□□□□□ -0.9
SPT20YOL148C LSM12P38828 187 aaKnown RBP9.42□□□□□ -0.9
SPT20YOL148C YAT2P40017 923 aa9.42□□□□□ -0.9
SPT20YOL148C PRM2P40534 656 aa9.42□□□□□ -0.9
SPT20YOL148C AIF1P52923 378 aa9.42□□□□□ -0.9
SPT20YOL148C DBP6P53734 629 aaKnown RBP9.42□□□□□ -0.9
SPT20YOL148C SLM2P53955 656 aa9.42□□□□□ -0.9
SPT20YOL148C SNU56Q03782 492 aaKnown RBP9.42□□□□□ -0.9
SPT20YOL148C CSN9Q03981 162 aa9.42□□□□□ -0.9
SPT20YOL148C TRM12Q04235 462 aa9.42□□□□□ -0.9
SPT20YOL148C ATG20Q07528 640 aa9.42□□□□□ -0.9
SPT20YOL148C YOL159CQ08300 171 aa9.42□□□□□ -0.9
SPT20YOL148C PCD1Q12524 340 aa9.42□□□□□ -0.9
SPT20YOL148C PHR1P05066 565 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
SPT20YOL148C ADE5,7P07244 802 aaKnown RBP9.42□□□□□ -0.9
SPT20YOL148C PET494P07390 489 aaPredicted RBP9.42□□□□□ -0.9
SPT20YOL148C CAP2P13517 287 aa9.42□□□□□ -0.9
SPT20YOL148C GRX2P17695 143 aaKnown RBP9.42□□□□□ -0.9
SPT20YOL148C PHO84P25297 587 aaKnown RBP9.42□□□□□ -0.9
SPT20YOL148C CHA1P25379 360 aaKnown RBP9.42□□□□□ -0.9
SPT20YOL148C YCL068CP25593 260 aa9.42□□□□□ -0.9
SPT20YOL148C PHO91P27514 894 aa9.42□□□□□ -0.9
SPT20YOL148C MRP4P32902 394 aa9.42□□□□□ -0.9
SPT20YOL148C YHR218WP38899 603 aa9.42□□□□□ -0.9
SPT20YOL148C FHL1P39521 936 aa9.42□□□□□ -0.9
SPT20YOL148C YEL020CP39994 560 aa9.42□□□□□ -0.9
SPT20YOL148C SET4P42948 560 aa9.42□□□□□ -0.9
SPT20YOL148C COS4P43542 379 aa9.42□□□□□ -0.9
SPT20YOL148C ASN1P49089 572 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms