RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W PTR2P32901 601 aa1.13□□□□□ -2.23
PRP39YML046W OCA5P38738 679 aa1.13□□□□□ -2.23
PRP39YML046W GPP1P41277 250 aaKnown RBP1.13□□□□□ -2.23
PRP39YML046W RBA50Q04418 439 aa1.13□□□□□ -2.23
PRP39YML046W UTP14Q04500 899 aaKnown RBP1.13□□□□□ -2.23
PRP39YML046W FMP45Q07651 309 aa1.13□□□□□ -2.23
PRP39YML046W CLB2P24869 491 aa1.12□□□□□ -2.23
PRP39YML046W DEG1P31115 442 aaKnown RBP1.12□□□□□ -2.23
PRP39YML046W PHD1P36093 366 aa1.12□□□□□ -2.23
PRP39YML046W YGR210CP42942 411 aa1.12□□□□□ -2.23
PRP39YML046W SPC105P53148 917 aa1.12□□□□□ -2.23
PRP39YML046W MSS11Q03825 758 aa1.12□□□□□ -2.23
PRP39YML046W AYT1Q12226 474 aa1.12□□□□□ -2.23
PRP39YML046W SEC16P48415 2195 aaKnown RBP1.12□□□□□ -2.23
PRP39YML046W RAP1P11938 827 aa1.12□□□□□ -2.23
PRP39YML046W SPT15P13393 240 aaKnown RBP1.12□□□□□ -2.23
PRP39YML046W KRS1P15180 591 aaKnown RBP1.12□□□□□ -2.23
PRP39YML046W NAM9P27929 486 aa1.12□□□□□ -2.23
PRP39YML046W YIM1P28625 365 aa1.12□□□□□ -2.23
PRP39YML046W RFS1P38234 210 aaKnown RBP1.12□□□□□ -2.23
PRP39YML046W YGL082WP53155 381 aa1.12□□□□□ -2.23
PRP39YML046W MOT3P54785 490 aaKnown RBP1.12□□□□□ -2.23
PRP39YML046W CDC45Q08032 650 aa1.12□□□□□ -2.23
PRP39YML046W PSF3Q12146 194 aa1.12□□□□□ -2.23
PRP39YML046W TOM1Q03280 3268 aa1.11□□□□□ -2.23
PRP39YML046W HEM2P05373 342 aa1.11□□□□□ -2.23
PRP39YML046W RPL20AP0CX23 172 aaKnown RBP1.11□□□□□ -2.23
PRP39YML046W RPL20BP0CX24 172 aaPredicted RBP1.11□□□□□ -2.23
PRP39YML046W MCM4P30665 933 aaKnown RBP1.11□□□□□ -2.23
PRP39YML046W YNK1P36010 153 aaKnown RBP1.11□□□□□ -2.23
PRP39YML046W RRP14P36080 434 aaKnown RBP1.11□□□□□ -2.23
PRP39YML046W TAF5P38129 798 aa1.11□□□□□ -2.23
PRP39YML046W UBP13P38187 747 aa1.11□□□□□ -2.23
PRP39YML046W MTC4P38335 694 aaKnown RBP1.11□□□□□ -2.23
PRP39YML046W PHO90P39535 881 aa1.11□□□□□ -2.23
PRP39YML046W DJP1P40564 432 aa1.11□□□□□ -2.23
PRP39YML046W YTP1P53584 459 aa1.11□□□□□ -2.23
PRP39YML046W CRD1Q07560 283 aa1.11□□□□□ -2.23
PRP39YML046W RRG7Q08774 242 aaPredicted RBP1.11□□□□□ -2.23
PRP39YML046W HRT3Q12347 344 aa1.11□□□□□ -2.23
PRP39YML046W SNF2P22082 1703 aa1.11□□□□□ -2.23
PRP39YML046W HNT3Q08702 217 aa1.1□□□□□ -2.23
PRP39YML046W REV3P14284 1504 aa1.1□□□□□ -2.23
PRP39YML046W LTE1P07866 1435 aa1.1□□□□□ -2.23
PRP39YML046W MMS1Q06211 1407 aa1.1□□□□□ -2.23
PRP39YML046W MRC1P25588 1096 aa1.09□□□□□ -2.23
PRP39YML046W PAD1P33751 242 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
PRP39YML046W SWD3P38123 315 aa1.09□□□□□ -2.23
PRP39YML046W GPP2P40106 250 aaKnown RBP1.09□□□□□ -2.23
PRP39YML046W YTA12P40341 825 aa1.09□□□□□ -2.23
PRP39YML046W SLD3P53135 668 aa1.09□□□□□ -2.23
PRP39YML046W YNR029CP53729 429 aaKnown RBP1.09□□□□□ -2.23
PRP39YML046W YER078W-AQ3E7A2 54 aa1.09□□□□□ -2.23
PRP39YML046W TOR2P32600 2474 aaKnown RBP1.09□□□□□ -2.24
PRP39YML046W COX11P19516 300 aaKnown RBP1.09□□□□□ -2.24
PRP39YML046W SGF29P25554 259 aa1.09□□□□□ -2.24
PRP39YML046W RFA2P26754 273 aaKnown RBP1.09□□□□□ -2.24
PRP39YML046W URK1P27515 501 aa1.09□□□□□ -2.24
PRP39YML046W YGR237CP50089 785 aa1.09□□□□□ -2.24
PRP39YML046W GPG1P53130 126 aa1.09□□□□□ -2.24
PRP39YML046W ALG12P53730 551 aa1.09□□□□□ -2.24
PRP39YML046W ARP6Q12509 438 aa1.09□□□□□ -2.24
PRP39YML046W MYO2P19524 1574 aaKnown RBP1.08□□□□□ -2.24
PRP39YML046W SUP35P05453 685 aaKnown RBP1.08□□□□□ -2.24
PRP39YML046W YBL059WP34224 193 aa1.08□□□□□ -2.24
PRP39YML046W MRP21P38175 177 aa1.08□□□□□ -2.24
PRP39YML046W NDT80P38830 627 aa1.08□□□□□ -2.24
PRP39YML046W TIF4631P39935 952 aaKnown RBP1.08□□□□□ -2.24
PRP39YML046W YIL060WP40519 144 aa1.08□□□□□ -2.24
PRP39YML046W DUG1P43616 481 aaKnown RBP1.08□□□□□ -2.24
PRP39YML046W YPL108WQ02872 168 aaPredicted RBP1.08□□□□□ -2.24
PRP39YML046W RBD2Q12270 262 aa1.08□□□□□ -2.24
PRP39YML046W IRA2P19158 3079 aa1.08□□□□□ -2.24
PRP39YML046W PET111P08468 800 aa1.07□□□□□ -2.24
PRP39YML046W TYR1P20049 452 aa1.07□□□□□ -2.24
PRP39YML046W YSP3P25036 478 aa1.07□□□□□ -2.24
PRP39YML046W RER1P25560 188 aa1.07□□□□□ -2.24
PRP39YML046W SAC6P32599 642 aaKnown RBP1.07□□□□□ -2.24
PRP39YML046W HCS1P34243 683 aa1.07□□□□□ -2.24
PRP39YML046W MID2P36027 376 aa1.07□□□□□ -2.24
PRP39YML046W TUL1P36096 758 aa1.07□□□□□ -2.24
PRP39YML046W YLF2P38746 405 aa1.07□□□□□ -2.24
PRP39YML046W AXL1P40851 1208 aa1.07□□□□□ -2.24
PRP39YML046W DCP2P53550 970 aaKnown RBP1.07□□□□□ -2.24
PRP39YML046W MSO1P53604 210 aaKnown RBP1.07□□□□□ -2.24
PRP39YML046W WSC2P53832 503 aa1.07□□□□□ -2.24
PRP39YML046W PDR15Q04182 1529 aaKnown RBP1.07□□□□□ -2.24
PRP39YML046W CLN3P13365 580 aa1.07□□□□□ -2.24
PRP39YML046W GAC1P28006 793 aa1.07□□□□□ -2.24
PRP39YML046W YKL097CP34245 136 aa1.07□□□□□ -2.24
PRP39YML046W UTH1P36135 365 aa1.07□□□□□ -2.24
PRP39YML046W PKP2P53170 491 aa1.07□□□□□ -2.24
PRP39YML046W VAS1P07806 1104 aaKnown RBP1.06□□□□□ -2.24
PRP39YML046W KAR1P11927 433 aa1.06□□□□□ -2.24
PRP39YML046W TGL1P34163 548 aa1.06□□□□□ -2.24
PRP39YML046W SIP2P34164 415 aaKnown RBP1.06□□□□□ -2.24
PRP39YML046W LHS1P36016 881 aa1.06□□□□□ -2.24
PRP39YML046W SDS22P36047 338 aa1.06□□□□□ -2.24
PRP39YML046W CTK2P46962 323 aa1.06□□□□□ -2.24
PRP39YML046W ECM38Q05902 660 aaPredicted RBP1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms