RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C DOT5P40553 215 aa6.75□□□□□ -1.33
ATG17YLR423C SAE2P46946 345 aa6.75□□□□□ -1.33
ATG17YLR423C YGR066CP53242 292 aa6.75□□□□□ -1.33
ATG17YLR423C ZDS2P54786 942 aa6.75□□□□□ -1.33
ATG17YLR423C YLR049CQ12110 428 aa6.75□□□□□ -1.33
ATG17YLR423C SFI1Q12369 946 aa6.75□□□□□ -1.33
ATG17YLR423C YJR112W-AQ3E743 109 aa6.75□□□□□ -1.33
ATG17YLR423C ARD1P07347 238 aaPredicted RBP6.74□□□□□ -1.33
ATG17YLR423C PWP1P21304 576 aaKnown RBP6.74□□□□□ -1.33
ATG17YLR423C ADH7P25377 361 aa6.74□□□□□ -1.33
ATG17YLR423C ORC2P32833 620 aa6.74□□□□□ -1.33
ATG17YLR423C FTH1P38310 465 aa6.74□□□□□ -1.33
ATG17YLR423C DIA4P38705 446 aaPredicted RBP6.74□□□□□ -1.33
ATG17YLR423C YFR020WP43600 232 aa6.74□□□□□ -1.33
ATG17YLR423C IRC8P47046 822 aa6.74□□□□□ -1.33
ATG17YLR423C RDL1Q12305 139 aaKnown RBP6.74□□□□□ -1.33
ATG17YLR423C SPE4Q12455 300 aa6.74□□□□□ -1.33
ATG17YLR423C LCB1P25045 558 aaKnown RBP6.73□□□□□ -1.33
ATG17YLR423C ADY2P25613 283 aa6.73□□□□□ -1.33
ATG17YLR423C GSY2P27472 705 aa6.73□□□□□ -1.33
ATG17YLR423C UIP3P39547 235 aa6.73□□□□□ -1.33
ATG17YLR423C CTK2P46962 323 aa6.73□□□□□ -1.33
ATG17YLR423C VID30P53076 958 aa6.73□□□□□ -1.33
ATG17YLR423C NNF2P53253 936 aa6.73□□□□□ -1.33
ATG17YLR423C YPR003CP53394 754 aa6.73□□□□□ -1.33
ATG17YLR423C GET3Q12154 354 aaKnown RBP6.73□□□□□ -1.33
ATG17YLR423C INP53Q12271 1107 aa6.73□□□□□ -1.33
ATG17YLR423C SUT2Q12286 268 aa6.73□□□□□ -1.33
ATG17YLR423C YPT6Q99260 215 aa6.73□□□□□ -1.33
ATG17YLR423C PET111P08468 800 aa6.72□□□□□ -1.33
ATG17YLR423C EST1P17214 699 aaPredicted RBP6.72□□□□□ -1.33
ATG17YLR423C PPZ2P33329 710 aa6.72□□□□□ -1.33
ATG17YLR423C PKP1P40530 394 aa6.72□□□□□ -1.33
ATG17YLR423C MAF1P41910 395 aa6.72□□□□□ -1.33
ATG17YLR423C QRI1P43123 477 aaKnown RBP6.72□□□□□ -1.33
ATG17YLR423C RPN11P43588 306 aaKnown RBP6.72□□□□□ -1.33
ATG17YLR423C PFA5Q03289 374 aa6.72□□□□□ -1.33
ATG17YLR423C BUD7Q08754 746 aa6.72□□□□□ -1.33
ATG17YLR423C FMP40Q08968 688 aaPredicted RBP6.72□□□□□ -1.33
ATG17YLR423C MF(ALPHA)1P01149 165 aa6.71□□□□□ -1.34
ATG17YLR423C ILS1P09436 1072 aaKnown RBP6.71□□□□□ -1.34
ATG17YLR423C ROX1P25042 368 aa6.71□□□□□ -1.34
ATG17YLR423C NFU1P32860 256 aa6.71□□□□□ -1.34
ATG17YLR423C YKL050CP35736 922 aa6.71□□□□□ -1.34
ATG17YLR423C UBP11P36026 717 aa6.71□□□□□ -1.34
ATG17YLR423C BYE1P36106 594 aa6.71□□□□□ -1.34
ATG17YLR423C MNN2P38069 597 aa6.71□□□□□ -1.34
ATG17YLR423C MUM2P38236 366 aa6.71□□□□□ -1.34
ATG17YLR423C LUC7Q07508 261 aaPredicted RBP6.71□□□□□ -1.34
ATG17YLR423C RIM20Q12033 661 aa6.71□□□□□ -1.34
ATG17YLR423C RTN2Q12443 393 aa6.71□□□□□ -1.34
ATG17YLR423C DFR1P07807 211 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
ATG17YLR423C NPL6P32832 435 aa6.7□□□□□ -1.34
ATG17YLR423C TAX4P47030 604 aa6.7□□□□□ -1.34
ATG17YLR423C SMC3P47037 1230 aa6.7□□□□□ -1.34
ATG17YLR423C ORC5P50874 479 aa6.7□□□□□ -1.34
ATG17YLR423C SNU56Q03782 492 aaKnown RBP6.7□□□□□ -1.34
ATG17YLR423C YMR155WQ03795 547 aa6.7□□□□□ -1.34
ATG17YLR423C DPB4Q04603 196 aaKnown RBP6.7□□□□□ -1.34
ATG17YLR423C VPS38Q05919 439 aa6.7□□□□□ -1.34
ATG17YLR423C SPN1Q06505 410 aaPredicted RBP6.7□□□□□ -1.34
ATG17YLR423C APL4Q12028 832 aa6.7□□□□□ -1.34
ATG17YLR423C RAP1P11938 827 aa6.69□□□□□ -1.34
ATG17YLR423C YCR006CP25350 157 aa6.69□□□□□ -1.34
ATG17YLR423C SEF1P34228 1148 aa6.69□□□□□ -1.34
ATG17YLR423C PXA2P34230 853 aa6.69□□□□□ -1.34
ATG17YLR423C IMD2P38697 523 aaKnown RBP6.69□□□□□ -1.34
ATG17YLR423C GPD2P41911 440 aaKnown RBP6.69□□□□□ -1.34
ATG17YLR423C IMD3P50095 523 aaKnown RBP6.69□□□□□ -1.34
ATG17YLR423C YGR127WP53275 312 aa6.69□□□□□ -1.34
ATG17YLR423C MAK10Q02197 733 aa6.69□□□□□ -1.34
ATG17YLR423C TPO3Q06451 622 aa6.69□□□□□ -1.34
ATG17YLR423C LEU9Q12166 604 aaKnown RBP6.69□□□□□ -1.34
ATG17YLR423C SNU114P36048 1008 aaKnown RBP6.68□□□□□ -1.34
ATG17YLR423C YEL057CP39983 233 aa6.68□□□□□ -1.34
ATG17YLR423C PTR3P43606 678 aa6.68□□□□□ -1.34
ATG17YLR423C FAR3P46671 204 aa6.68□□□□□ -1.34
ATG17YLR423C YDR239CQ03780 787 aa6.68□□□□□ -1.34
ATG17YLR423C BSP1Q06604 576 aa6.68□□□□□ -1.34
ATG17YLR423C ATG9Q12142 997 aa6.68□□□□□ -1.34
ATG17YLR423C DBF4P32325 704 aa6.67□□□□□ -1.34
ATG17YLR423C ERG3P32353 365 aa6.67□□□□□ -1.34
ATG17YLR423C HOT13P36078 116 aa6.67□□□□□ -1.34
ATG17YLR423C ALG5P40350 334 aa6.67□□□□□ -1.34
ATG17YLR423C AVL9Q12500 764 aa6.67□□□□□ -1.34
ATG17YLR423C GAL80P04387 435 aa6.66□□□□□ -1.34
ATG17YLR423C MAK32P23060 363 aa6.66□□□□□ -1.34
ATG17YLR423C SSE2P32590 693 aaKnown RBP6.66□□□□□ -1.34
ATG17YLR423C ICS2P38284 255 aa6.66□□□□□ -1.34
ATG17YLR423C CCT6P39079 546 aa6.66□□□□□ -1.34
ATG17YLR423C ELO1P39540 310 aa6.66□□□□□ -1.34
ATG17YLR423C ERV46P39727 415 aa6.66□□□□□ -1.34
ATG17YLR423C SGN1P40561 250 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
ATG17YLR423C MET28P40573 187 aa6.66□□□□□ -1.34
ATG17YLR423C CIN1P40987 1014 aa6.66□□□□□ -1.34
ATG17YLR423C ATP23P53722 227 aa6.66□□□□□ -1.34
ATG17YLR423C IPI3P53877 555 aa6.66□□□□□ -1.34
ATG17YLR423C ORM2Q06144 216 aa6.66□□□□□ -1.34
ATG17YLR423C PDR8Q06149 701 aa6.66□□□□□ -1.34
ATG17YLR423C PDA1P16387 420 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms