RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W ELG1Q12050 791 aa3.68□□□□□ -1.82
LCB5YLR260W GNT1Q12096 491 aa3.68□□□□□ -1.82
LCB5YLR260W ZPS1Q12512 249 aa3.68□□□□□ -1.82
LCB5YLR260W LAA1P39526 2014 aa3.68□□□□□ -1.82
LCB5YLR260W ALG1P16661 449 aa3.67□□□□□ -1.82
LCB5YLR260W DBP2P24783 546 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W YUH1P35127 236 aa3.67□□□□□ -1.82
LCB5YLR260W YKT6P36015 200 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W ARL1P38116 183 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W YHR097CP38809 366 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W MRX1P40050 688 aa3.67□□□□□ -1.82
LCB5YLR260W PKP1P40530 394 aa3.67□□□□□ -1.82
LCB5YLR260W CUL3P53202 744 aa3.67□□□□□ -1.82
LCB5YLR260W YNR014WP53719 212 aa3.67□□□□□ -1.82
LCB5YLR260W DON1Q05610 365 aa3.67□□□□□ -1.82
LCB5YLR260W YLR455WQ06188 304 aa3.67□□□□□ -1.82
LCB5YLR260W YDL057WQ07379 328 aa3.67□□□□□ -1.82
LCB5YLR260W NGL1Q08213 363 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W DAP1Q12091 152 aa3.67□□□□□ -1.82
LCB5YLR260W TIP41Q12199 356 aa3.67□□□□□ -1.82
LCB5YLR260W ZRT2Q12436 422 aa3.67□□□□□ -1.82
LCB5YLR260W SKM1Q12469 655 aa3.67□□□□□ -1.82
LCB5YLR260W GCD1P09032 578 aaPredicted RBP3.67□□□□□ -1.82
LCB5YLR260W GLN4P13188 809 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W PUT4P15380 627 aa3.67□□□□□ -1.82
LCB5YLR260W PEX2P32800 271 aa3.67□□□□□ -1.82
LCB5YLR260W MRP4P32902 394 aa3.67□□□□□ -1.82
LCB5YLR260W MAL33P38157 468 aa3.67□□□□□ -1.82
LCB5YLR260W ALG3P38179 458 aa3.67□□□□□ -1.82
LCB5YLR260W SIP3P38717 1229 aa3.67□□□□□ -1.82
LCB5YLR260W YHL026CP38740 315 aa3.67□□□□□ -1.82
LCB5YLR260W YFL066CP43538 392 aa3.67□□□□□ -1.82
LCB5YLR260W IRC5P43610 853 aa3.67□□□□□ -1.82
LCB5YLR260W MET12P46151 657 aa3.67□□□□□ -1.82
LCB5YLR260W HXT16P47185 567 aa3.67□□□□□ -1.82
LCB5YLR260W SHE4P51534 789 aa3.67□□□□□ -1.82
LCB5YLR260W TEL2P53038 688 aa3.67□□□□□ -1.82
LCB5YLR260W HOP2P53187 214 aa3.67□□□□□ -1.82
LCB5YLR260W LSC1P53598 329 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W YNL146WP53906 100 aa3.67□□□□□ -1.82
LCB5YLR260W SFB2P53953 876 aa3.67□□□□□ -1.82
LCB5YLR260W YAP6Q03935 383 aa3.67□□□□□ -1.82
LCB5YLR260W DOT1Q04089 582 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W RRT8Q08219 342 aa3.67□□□□□ -1.82
LCB5YLR260W IES4Q08561 116 aa3.67□□□□□ -1.82
LCB5YLR260W SPE3Q12074 293 aaKnown RBP3.67□□□□□ -1.82
LCB5YLR260W HUA2Q12134 243 aa3.67□□□□□ -1.82
LCB5YLR260W YOR022CQ12204 715 aa3.67□□□□□ -1.82
LCB5YLR260W GPM3Q12326 303 aa3.67□□□□□ -1.82
LCB5YLR260W CCH1P50077 2039 aa3.66□□□□□ -1.82
LCB5YLR260W SEC53P07283 254 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W WHI2P12611 486 aa3.66□□□□□ -1.82
LCB5YLR260W TCP1P12612 559 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W CDC26P14724 124 aa3.66□□□□□ -1.82
LCB5YLR260W GLN3P18494 730 aa3.66□□□□□ -1.82
LCB5YLR260W CLN1P20437 546 aa3.66□□□□□ -1.82
LCB5YLR260W ISY1P21374 235 aaPredicted RBP3.66□□□□□ -1.82
LCB5YLR260W DMC1P25453 334 aa3.66□□□□□ -1.82
LCB5YLR260W CYS3P31373 394 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W CDC12P32468 407 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W YEL043WP32618 956 aa3.66□□□□□ -1.82
LCB5YLR260W CTF13P35203 478 aa3.66□□□□□ -1.82
LCB5YLR260W MAE1P36013 669 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W REI1P38344 393 aaPredicted RBP3.66□□□□□ -1.82
LCB5YLR260W RRM3P38766 723 aa3.66□□□□□ -1.82
LCB5YLR260W LYS9P38999 446 aa3.66□□□□□ -1.82
LCB5YLR260W RPN3P40016 523 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W ALY2P47029 1046 aa3.66□□□□□ -1.82
LCB5YLR260W CAF130P53280 1122 aaPredicted RBP3.66□□□□□ -1.82
LCB5YLR260W RTT102P53330 157 aa3.66□□□□□ -1.82
LCB5YLR260W YSA1Q01976 231 aa3.66□□□□□ -1.82
LCB5YLR260W MTD1Q02046 320 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W SNZ1Q03148 297 aa3.66□□□□□ -1.82
LCB5YLR260W INP2Q03824 705 aa3.66□□□□□ -1.82
LCB5YLR260W IWR1Q07532 353 aaPredicted RBP3.66□□□□□ -1.82
LCB5YLR260W SMC5Q08204 1093 aa3.66□□□□□ -1.82
LCB5YLR260W YOR019WQ99248 730 aa3.66□□□□□ -1.82
LCB5YLR260W RPL4AP10664 362 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W MDH1P17505 334 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
LCB5YLR260W RDS1P25611 832 aa3.66□□□□□ -1.82
LCB5YLR260W CWH43P25618 953 aa3.66□□□□□ -1.82
LCB5YLR260W HXT4P32467 576 aa3.66□□□□□ -1.82
LCB5YLR260W CSE2P33308 149 aa3.66□□□□□ -1.82
LCB5YLR260W MRPL40P36534 297 aa3.66□□□□□ -1.82
LCB5YLR260W ADH5P38113 351 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W PEX32P38292 413 aa3.66□□□□□ -1.82
LCB5YLR260W RGD1P38339 666 aa3.66□□□□□ -1.82
LCB5YLR260W SRP68P38687 599 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W MUP3P38734 546 aa3.66□□□□□ -1.82
LCB5YLR260W AIM10P39965 576 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W YJR061WP40355 935 aa3.66□□□□□ -1.82
LCB5YLR260W PRM2P40534 656 aa3.66□□□□□ -1.82
LCB5YLR260W SSU1P41930 458 aa3.66□□□□□ -1.82
LCB5YLR260W BPL1P48445 690 aaPredicted RBP3.66□□□□□ -1.82
LCB5YLR260W RPL4BP49626 362 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W NIT3P49954 291 aa3.66□□□□□ -1.82
LCB5YLR260W PSP1P50896 841 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W TAM41P53230 385 aa3.66□□□□□ -1.82
LCB5YLR260W RRB1Q04225 511 aaKnown RBP3.66□□□□□ -1.82
LCB5YLR260W MGR3Q04472 501 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms