RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C MRS2Q01926 470 aa10.4□□□□□ -0.75
SHM2YLR058C HPT1Q04178 221 aaKnown RBP10.4□□□□□ -0.75
SHM2YLR058C CIA1Q05583 330 aa10.4□□□□□ -0.75
SHM2YLR058C CRN1Q06440 651 aa10.4□□□□□ -0.75
SHM2YLR058C TGL5Q12043 749 aa10.4□□□□□ -0.75
SHM2YLR058C APC9Q12107 265 aa10.4□□□□□ -0.75
SHM2YLR058C UBX3Q12229 455 aa10.4□□□□□ -0.75
SHM2YLR058C MEX67Q99257 599 aaKnown RBP10.4□□□□□ -0.75
SHM2YLR058C SEC53P07283 254 aaKnown RBP10.39□□□□□ -0.75
SHM2YLR058C APA1P16550 321 aaKnown RBP10.39□□□□□ -0.75
SHM2YLR058C SPS19P32573 292 aaKnown RBP10.39□□□□□ -0.75
SHM2YLR058C ASK1P35734 292 aa10.39□□□□□ -0.75
SHM2YLR058C RRN3P36070 627 aa10.39□□□□□ -0.75
SHM2YLR058C GDT1P38301 280 aaPredicted RBP10.39□□□□□ -0.75
SHM2YLR058C YDR089WP38966 869 aa10.39□□□□□ -0.75
SHM2YLR058C NUP84P52891 726 aa10.39□□□□□ -0.75
SHM2YLR058C TAF6P53040 516 aa10.39□□□□□ -0.75
SHM2YLR058C YMR155WQ03795 547 aa10.39□□□□□ -0.75
SHM2YLR058C SHE9Q04172 456 aa10.39□□□□□ -0.75
SHM2YLR058C COX6P00427 148 aa10.38□□□□□ -0.75
SHM2YLR058C RAD3P06839 778 aa10.38□□□□□ -0.75
SHM2YLR058C HEM3P28789 327 aa10.38□□□□□ -0.75
SHM2YLR058C SFP1P32432 683 aa10.38□□□□□ -0.75
SHM2YLR058C LRG1P35688 1017 aa10.38□□□□□ -0.75
SHM2YLR058C MUP3P38734 546 aa10.38□□□□□ -0.75
SHM2YLR058C STN1P38960 494 aa10.38□□□□□ -0.75
SHM2YLR058C IRR1P40541 1150 aa10.38□□□□□ -0.75
SHM2YLR058C MAD3P47074 515 aa10.38□□□□□ -0.75
SHM2YLR058C SWC4P53201 476 aa10.38□□□□□ -0.75
SHM2YLR058C AQR1P53943 586 aa10.38□□□□□ -0.75
SHM2YLR058C OSH6Q02201 448 aa10.38□□□□□ -0.75
SHM2YLR058C BUD7Q08754 746 aa10.38□□□□□ -0.75
SHM2YLR058C MDY2Q12285 212 aa10.38□□□□□ -0.75
SHM2YLR058C ICT1Q12385 394 aa10.38□□□□□ -0.75
SHM2YLR058C PTM1P32857 523 aa10.37□□□□□ -0.75
SHM2YLR058C PRP18P33411 251 aaPredicted RBP10.37□□□□□ -0.75
SHM2YLR058C PCL5P38794 229 aa10.37□□□□□ -0.75
SHM2YLR058C ARC1P46672 376 aaKnown RBP10.37□□□□□ -0.75
SHM2YLR058C CLU1Q03690 1277 aaKnown RBP10.37□□□□□ -0.75
SHM2YLR058C BLS1Q06071 122 aa10.37□□□□□ -0.75
SHM2YLR058C VTA1Q06263 330 aa10.37□□□□□ -0.75
SHM2YLR058C TMA46Q12000 345 aaKnown RBP10.37□□□□□ -0.75
SHM2YLR058C SMF3Q12078 473 aaPredicted RBP10.37□□□□□ -0.75
SHM2YLR058C UPC2Q12151 913 aa10.37□□□□□ -0.75
SHM2YLR058C STB3Q12427 513 aa10.37□□□□□ -0.75
SHM2YLR058C VAC17P25591 423 aa10.36□□□□□ -0.75
SHM2YLR058C CSE1P33307 960 aa10.36□□□□□ -0.75
SHM2YLR058C HSM3P38348 480 aa10.36□□□□□ -0.75
SHM2YLR058C PPX1P38698 397 aa10.36□□□□□ -0.75
SHM2YLR058C DBP8P38719 431 aa10.36□□□□□ -0.75
SHM2YLR058C EFM1P38732 585 aa10.36□□□□□ -0.75
SHM2YLR058C YHR078WP38799 552 aa10.36□□□□□ -0.75
SHM2YLR058C AXL1P40851 1208 aa10.36□□□□□ -0.75
SHM2YLR058C FAA4P47912 694 aaKnown RBP10.36□□□□□ -0.75
SHM2YLR058C TEL2P53038 688 aa10.36□□□□□ -0.75
SHM2YLR058C YML119WQ03208 357 aa10.36□□□□□ -0.75
SHM2YLR058C HBT1Q07653 1046 aaKnown RBP10.36□□□□□ -0.75
SHM2YLR058C GNT1Q12096 491 aa10.36□□□□□ -0.75
SHM2YLR058C YPL247CQ12523 523 aa10.36□□□□□ -0.75
SHM2YLR058C SBP1P10080 294 aaKnown RBP10.35□□□□□ -0.75
SHM2YLR058C BAS1P22035 811 aa10.35□□□□□ -0.75
SHM2YLR058C EPT1P22140 391 aa10.35□□□□□ -0.75
SHM2YLR058C VAN1P23642 535 aa10.35□□□□□ -0.75
SHM2YLR058C THI80P35202 319 aa10.35□□□□□ -0.75
SHM2YLR058C VRP1P37370 817 aa10.35□□□□□ -0.75
SHM2YLR058C MRX1P40050 688 aa10.35□□□□□ -0.75
SHM2YLR058C GCD14P46959 383 aaPredicted RBP10.35□□□□□ -0.75
SHM2YLR058C AIF1P52923 378 aa10.35□□□□□ -0.75
SHM2YLR058C MTO1P53070 669 aa10.35□□□□□ -0.75
SHM2YLR058C SMA1Q02651 245 aa10.35□□□□□ -0.75
SHM2YLR058C GOT1Q03554 138 aa10.35□□□□□ -0.75
SHM2YLR058C TAF12Q03761 539 aa10.35□□□□□ -0.75
SHM2YLR058C SPO20Q04359 397 aa10.35□□□□□ -0.75
SHM2YLR058C ENT4Q07872 247 aa10.35□□□□□ -0.75
SHM2YLR058C NOT5Q12514 560 aaPredicted RBP10.35□□□□□ -0.75
SHM2YLR058C YPR089WO13585 888 aa10.34□□□□□ -0.75
SHM2YLR058C RPB4P20433 221 aaPredicted RBP10.34□□□□□ -0.75
SHM2YLR058C YCR090CP25654 182 aaKnown RBP10.34□□□□□ -0.75
SHM2YLR058C RPC19P28000 142 aaKnown RBP10.34□□□□□ -0.75
SHM2YLR058C PIK1P39104 1066 aa10.34□□□□□ -0.75
SHM2YLR058C PRM2P40534 656 aa10.34□□□□□ -0.75
SHM2YLR058C DAN4P47179 1161 aa10.34□□□□□ -0.75
SHM2YLR058C ART5P53244 586 aaKnown RBP10.34□□□□□ -0.75
SHM2YLR058C NPL3Q01560 414 aaKnown RBP RIP-Chip data10.34□□□□□ -0.75not detected
SHM2YLR058C NHP10Q03435 203 aa10.34□□□□□ -0.75
SHM2YLR058C TVP15Q03860 143 aa10.34□□□□□ -0.75
SHM2YLR058C RCO1Q04779 684 aa10.34□□□□□ -0.75
SHM2YLR058C SEC10Q06245 871 aa10.34□□□□□ -0.75
SHM2YLR058C NOB1Q08444 459 aaKnown RBP10.34□□□□□ -0.75
SHM2YLR058C RHO2P06781 192 aa10.33□□□□□ -0.76
SHM2YLR058C NIP1P32497 812 aaKnown RBP10.33□□□□□ -0.76
SHM2YLR058C MRE11P32829 692 aa10.33□□□□□ -0.76
SHM2YLR058C TIP20P33891 701 aa10.33□□□□□ -0.76
SHM2YLR058C TFC3P34111 1160 aa10.33□□□□□ -0.76
SHM2YLR058C IML3P38265 245 aa10.33□□□□□ -0.76
SHM2YLR058C TAE1P38340 232 aa10.33□□□□□ -0.76
SHM2YLR058C FMO1P38866 432 aa10.33□□□□□ -0.76
SHM2YLR058C MPT5P39016 859 aaKnown RBP RIP-Chip data10.33□□□□□ -0.76not detected
SHM2YLR058C YHB1P39676 399 aaKnown RBP10.33□□□□□ -0.76
SHM2YLR058C NBP35P52920 328 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms