RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C ASP3-4P0CX79 362 aa2.37□□□□□ -2.03
VPS13YLL040C ASP3-1P0CZ17 362 aa2.37□□□□□ -2.03
VPS13YLL040C HOM2P13663 365 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C RSR1P13856 272 aa2.37□□□□□ -2.03
VPS13YLL040C LOT5P34234 306 aa2.37□□□□□ -2.03
VPS13YLL040C ABZ1P37254 787 aaPredicted RBP2.37□□□□□ -2.03
VPS13YLL040C PAM1P37304 830 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C ECM13P38195 257 aa2.37□□□□□ -2.03
VPS13YLL040C TSL1P38427 1098 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C APE4P38821 490 aa2.37□□□□□ -2.03
VPS13YLL040C YDR089WP38966 869 aa2.37□□□□□ -2.03
VPS13YLL040C CEM1P39525 442 aa2.37□□□□□ -2.03
VPS13YLL040C STB2P46679 850 aa2.37□□□□□ -2.03
VPS13YLL040C KEL2P50090 882 aa2.37□□□□□ -2.03
VPS13YLL040C RBG2P53295 368 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C KIN4Q01919 800 aa2.37□□□□□ -2.03
VPS13YLL040C YPL014WQ02606 381 aa2.37□□□□□ -2.03
VPS13YLL040C GSF2Q04697 403 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C YOR214CQ12282 236 aa2.37□□□□□ -2.03
VPS13YLL040C RPS5P26783 225 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C GPI10P30777 616 aa2.37□□□□□ -2.03
VPS13YLL040C MF(ALPHA)2P32435 120 aa2.37□□□□□ -2.03
VPS13YLL040C LRG1P35688 1017 aa2.37□□□□□ -2.03
VPS13YLL040C MAE1P36013 669 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C VAC8P39968 578 aa2.37□□□□□ -2.03
VPS13YLL040C UBP7P40453 1071 aa2.37□□□□□ -2.03
VPS13YLL040C ALR2P43553 858 aa2.37□□□□□ -2.03
VPS13YLL040C YGR035CP53222 116 aa2.37□□□□□ -2.03
VPS13YLL040C GND2P53319 492 aa2.37□□□□□ -2.03
VPS13YLL040C DYN3Q04949 312 aa2.37□□□□□ -2.03
VPS13YLL040C DNL4Q08387 944 aaPredicted RBP2.37□□□□□ -2.03
VPS13YLL040C GTT2Q12390 233 aa2.37□□□□□ -2.03
VPS13YLL040C RRD2Q12461 358 aa2.37□□□□□ -2.03
VPS13YLL040C ATP1P07251 545 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C NMT1P14743 455 aa2.37□□□□□ -2.03
VPS13YLL040C MSM1P22438 575 aa2.37□□□□□ -2.03
VPS13YLL040C RPS7AP26786 190 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C FET4P40988 552 aa2.37□□□□□ -2.03
VPS13YLL040C RLI1Q03195 608 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C TRS130Q03660 1102 aa2.37□□□□□ -2.03
VPS13YLL040C ARP10Q04549 284 aa2.37□□□□□ -2.03
VPS13YLL040C ECM30Q06673 1274 aa2.37□□□□□ -2.03
VPS13YLL040C FMP45Q07651 309 aa2.37□□□□□ -2.03
VPS13YLL040C ATP16Q12165 160 aa2.37□□□□□ -2.03
VPS13YLL040C YDR061WQ12298 539 aa2.37□□□□□ -2.03
VPS13YLL040C PNS1Q12412 539 aa2.37□□□□□ -2.03
VPS13YLL040C YHR213W-AQ8TGT4 77 aa2.37□□□□□ -2.03
VPS13YLL040C VCX1Q99385 411 aa2.37□□□□□ -2.03
VPS13YLL040C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VPS13YLL040C DAL2P25335 343 aa2.37□□□□□ -2.03
VPS13YLL040C EMC1P25574 760 aa2.37□□□□□ -2.03
VPS13YLL040C THI4P32318 326 aa2.37□□□□□ -2.03
VPS13YLL040C POP8P38208 133 aa2.37□□□□□ -2.03
VPS13YLL040C YBR225WP38321 900 aa2.37□□□□□ -2.03
VPS13YLL040C GID8P40208 455 aa2.37□□□□□ -2.03
VPS13YLL040C PDS1P40316 373 aaPredicted RBP2.37□□□□□ -2.03
VPS13YLL040C ELO3P40319 345 aa2.37□□□□□ -2.03
VPS13YLL040C YIL054WP40524 105 aa2.37□□□□□ -2.03
VPS13YLL040C COG2P53271 262 aa2.37□□□□□ -2.03
VPS13YLL040C BIO4P53630 237 aa2.37□□□□□ -2.03
VPS13YLL040C DOS2P54858 310 aa2.37□□□□□ -2.03
VPS13YLL040C BET4Q00618 327 aa2.37□□□□□ -2.03
VPS13YLL040C MZM1Q03429 123 aaPredicted RBP2.37□□□□□ -2.03
VPS13YLL040C GPM2Q12008 311 aa2.37□□□□□ -2.03
VPS13YLL040C YPL066WQ12194 479 aa2.37□□□□□ -2.03
VPS13YLL040C YOR012WQ12351 137 aa2.37□□□□□ -2.03
VPS13YLL040C COX6P00427 148 aa2.37□□□□□ -2.03
VPS13YLL040C PHO84P25297 587 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C GIT1P25346 518 aa2.37□□□□□ -2.03
VPS13YLL040C CTS1P29029 562 aa2.37□□□□□ -2.03
VPS13YLL040C PRM2P40534 656 aa2.37□□□□□ -2.03
VPS13YLL040C SEC27P41811 889 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C GCV1P48015 400 aa2.37□□□□□ -2.03
VPS13YLL040C YGR168CP53293 376 aa2.37□□□□□ -2.03
VPS13YLL040C YLR031WQ07978 186 aa2.37□□□□□ -2.03
VPS13YLL040C YOL107WQ12239 342 aa2.37□□□□□ -2.03
VPS13YLL040C RUP1Q12242 671 aa2.37□□□□□ -2.03
VPS13YLL040C UBA1P22515 1024 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C GBP2P25555 427 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VPS13YLL040C YCR015CP25616 317 aa2.37□□□□□ -2.03
VPS13YLL040C GLN1P32288 370 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C NUF2P33895 451 aa2.37□□□□□ -2.03
VPS13YLL040C PIN4P34217 668 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VPS13YLL040C YHR033WP38690 423 aa2.37□□□□□ -2.03
VPS13YLL040C MUP3P38734 546 aa2.37□□□□□ -2.03
VPS13YLL040C UBA4P38820 440 aa2.37□□□□□ -2.03
VPS13YLL040C FIR1P40020 876 aa2.37□□□□□ -2.03
VPS13YLL040C MSS2P40990 351 aa2.37□□□□□ -2.03
VPS13YLL040C MON1P53129 644 aa2.37□□□□□ -2.03
VPS13YLL040C YNL010WP53981 241 aaKnown RBP2.37□□□□□ -2.03
VPS13YLL040C NSE5Q03718 556 aa2.37□□□□□ -2.03
VPS13YLL040C MUS81Q04149 632 aaPredicted RBP2.37□□□□□ -2.03
VPS13YLL040C GLE1Q12315 538 aa2.37□□□□□ -2.03
VPS13YLL040C YMR084WA2P2R3 262 aa2.37□□□□□ -2.03
VPS13YLL040C STP2P38704 541 aa2.37□□□□□ -2.03
VPS13YLL040C YHR112CP38716 378 aa2.37□□□□□ -2.03
VPS13YLL040C HSE1P38753 452 aa2.37□□□□□ -2.03
VPS13YLL040C CHS6P40955 746 aa2.37□□□□□ -2.03
VPS13YLL040C MKC7P53379 596 aa2.37□□□□□ -2.03
VPS13YLL040C YPS7Q06325 596 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms