RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C CSM2P40465 213 aa5.47□□□□□ -1.53
VPS1YKR001C GVP36P40531 326 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C FAR7P43592 221 aa5.47□□□□□ -1.53
VPS1YKR001C YJR056CP47115 236 aa5.47□□□□□ -1.53
VPS1YKR001C PSP2P50109 593 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C SLX9P53251 210 aaPredicted RBP5.47□□□□□ -1.53
VPS1YKR001C GCN5Q03330 439 aa5.47□□□□□ -1.53
VPS1YKR001C DCR2Q05924 578 aa5.47□□□□□ -1.53
VPS1YKR001C RGC1Q06108 1083 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C SPO77Q06134 477 aa5.47□□□□□ -1.53
VPS1YKR001C TRE2Q08693 809 aa5.47□□□□□ -1.53
VPS1YKR001C AKR2Q12013 749 aa5.47□□□□□ -1.53
VPS1YKR001C CCH1P50077 2039 aa5.47□□□□□ -1.53
VPS1YKR001C PRC1P00729 532 aa5.47□□□□□ -1.53
VPS1YKR001C CDC36P06100 191 aaPredicted RBP5.47□□□□□ -1.53
VPS1YKR001C HSF1P10961 833 aa5.47□□□□□ -1.53
VPS1YKR001C MBR1P23493 339 aa5.47□□□□□ -1.53
VPS1YKR001C PPZ1P26570 692 aa5.47□□□□□ -1.53
VPS1YKR001C HXT1P32465 570 aa5.47□□□□□ -1.53
VPS1YKR001C SPT10P35208 640 aa5.47□□□□□ -1.53
VPS1YKR001C DRE2P36152 348 aa5.47□□□□□ -1.53
VPS1YKR001C APN2P38207 520 aa5.47□□□□□ -1.53
VPS1YKR001C UBS1P38290 277 aa5.47□□□□□ -1.53
VPS1YKR001C YBR225WP38321 900 aa5.47□□□□□ -1.53
VPS1YKR001C SSH1P38353 490 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C YHR182WP38870 785 aa5.47□□□□□ -1.53
VPS1YKR001C CRG1P38892 291 aaRIP-Chip data5.47□□□□□ -1.53 RIP-Chip
VPS1YKR001C SUR2P38992 349 aa5.47□□□□□ -1.53
VPS1YKR001C LSM1P47017 172 aaKnown RBP5.47□□□□□ -1.53
VPS1YKR001C MTO1P53070 669 aa5.47□□□□□ -1.53
VPS1YKR001C ACS1Q01574 713 aa5.47□□□□□ -1.53
VPS1YKR001C YLR455WQ06188 304 aa5.47□□□□□ -1.53
VPS1YKR001C PNS1Q12412 539 aa5.47□□□□□ -1.53
VPS1YKR001C RPS9AO13516 197 aaKnown RBP5.46□□□□□ -1.54
VPS1YKR001C SCEIP03882 235 aa5.46□□□□□ -1.54
VPS1YKR001C GCN3P14741 305 aa5.46□□□□□ -1.54
VPS1YKR001C RPD3P32561 433 aa5.46□□□□□ -1.54
VPS1YKR001C RPT5P33297 434 aaKnown RBP5.46□□□□□ -1.54
VPS1YKR001C SUR1P33300 382 aa5.46□□□□□ -1.54
VPS1YKR001C TAT2P38967 592 aa5.46□□□□□ -1.54
VPS1YKR001C SLM1P40485 686 aa5.46□□□□□ -1.54
VPS1YKR001C AXL1P40851 1208 aa5.46□□□□□ -1.54
VPS1YKR001C NOP9P47077 666 aaKnown RBP5.46□□□□□ -1.54
VPS1YKR001C BPL1P48445 690 aaPredicted RBP5.46□□□□□ -1.54
VPS1YKR001C BRO1P48582 844 aa5.46□□□□□ -1.54
VPS1YKR001C NUT1P53114 1132 aa5.46□□□□□ -1.54
VPS1YKR001C YGR127WP53275 312 aa5.46□□□□□ -1.54
VPS1YKR001C MPS1P54199 764 aa5.46□□□□□ -1.54
VPS1YKR001C GLO2Q05584 274 aa5.46□□□□□ -1.54
VPS1YKR001C GPI13Q07830 1017 aa5.46□□□□□ -1.54
VPS1YKR001C UIP4Q08926 304 aa5.46□□□□□ -1.54
VPS1YKR001C TGS1Q12052 315 aa5.46□□□□□ -1.54
VPS1YKR001C SWI4P25302 1093 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C MDL1P33310 695 aa5.45□□□□□ -1.54
VPS1YKR001C RER2P35196 286 aa5.45□□□□□ -1.54
VPS1YKR001C NTC20P38302 140 aaPredicted RBP5.45□□□□□ -1.54
VPS1YKR001C MGE1P38523 228 aa5.45□□□□□ -1.54
VPS1YKR001C SBE22P38814 852 aa5.45□□□□□ -1.54
VPS1YKR001C SPF1P39986 1215 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C YEL025CP39991 1188 aa5.45□□□□□ -1.54
VPS1YKR001C GTO1P48239 356 aa5.45□□□□□ -1.54
VPS1YKR001C PCL10P53124 433 aa5.45□□□□□ -1.54
VPS1YKR001C SNF12P53628 566 aa5.45□□□□□ -1.54
VPS1YKR001C STE23Q06010 1027 aa5.45□□□□□ -1.54
VPS1YKR001C VPS74Q06385 345 aa5.45□□□□□ -1.54
VPS1YKR001C IRC10Q08118 586 aa5.45□□□□□ -1.54
VPS1YKR001C SGT1Q08446 395 aa5.45□□□□□ -1.54
VPS1YKR001C MUM3Q08750 479 aa5.45□□□□□ -1.54
VPS1YKR001C RPS17AP02407 136 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C ARG3P05150 338 aa5.45□□□□□ -1.54
VPS1YKR001C TCP1P12612 559 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C RPS17BP14127 136 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C DBP5P20449 482 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C UBC1P21734 215 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C MNE1P24720 663 aa5.45□□□□□ -1.54
VPS1YKR001C THI4P32318 326 aa5.45□□□□□ -1.54
VPS1YKR001C MAE1P36013 669 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C RCN1P36054 211 aa5.45□□□□□ -1.54
VPS1YKR001C MCM7P38132 845 aa5.45□□□□□ -1.54
VPS1YKR001C MAP2P38174 421 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C RFC3P38629 340 aa5.45□□□□□ -1.54
VPS1YKR001C GRE3P38715 327 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
VPS1YKR001C STT3P39007 718 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C PZF1P39933 429 aa5.45□□□□□ -1.54
VPS1YKR001C TPA1P40032 644 aaKnown RBP5.45□□□□□ -1.54
VPS1YKR001C YMR134WP40207 237 aa5.45□□□□□ -1.54
VPS1YKR001C ASG1P40467 964 aa5.45□□□□□ -1.54
VPS1YKR001C NAS2P40555 220 aa5.45□□□□□ -1.54
VPS1YKR001C IMA5P40884 581 aa5.45□□□□□ -1.54
VPS1YKR001C TMA22P47089 198 aaPredicted RBP5.45□□□□□ -1.54
VPS1YKR001C AIM24P47127 394 aa5.45□□□□□ -1.54
VPS1YKR001C YGR111WP53265 400 aa5.45□□□□□ -1.54
VPS1YKR001C MEP3P53390 489 aa5.45□□□□□ -1.54
VPS1YKR001C PEX25Q02969 394 aa5.45□□□□□ -1.54
VPS1YKR001C WAR1Q03631 944 aa5.45□□□□□ -1.54
VPS1YKR001C TDA9Q04545 1251 aa5.45□□□□□ -1.54
VPS1YKR001C ECM18Q04623 453 aa5.45□□□□□ -1.54
VPS1YKR001C YPL216WQ08964 1102 aa5.45□□□□□ -1.54
VPS1YKR001C YLR125WQ12138 136 aa5.45□□□□□ -1.54
VPS1YKR001C MDM12Q92328 271 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms